The cloud admin interface's automatic update mechanism doesn't currently
support toolshed updates due to the interaction required. At this point, if
you're updating a cloud instance you'll need to do it manually. SSH in, switch
to the galaxy user, navigate to /mnt/galaxyTools/galaxy-central,
Hello,
I recently updated my instance of Galaxy Cloudman (using Amazon AWS) and I
have since not been able to run any jobs. I get the following error:
WARNING:galaxy.datatypes.registry:Error loading datatype with
extension 'blastxml': 'module' object has no attribute 'BlastXml'
Hi
The BLAST+ tools and the definition of the blastxml format were moved to
the tool shed. You should have seen a migration message during the update...
If you are not using these tools, perhaps you have a legacy reference to
the blastxml file which should be removed?
If you are using BLAST+
Hi Mohammad,
Don't forget to CC the mailing list ;)
It sounds like something has gone wrong with the update...
Peter
On Wednesday, August 29, 2012, Mohammad Heydarian wrote:
Hi Peter,
Thanks for your response.
I am not using any of the Blast tools, I have only tried using the filter
and
