On Aug 14, 2013, at 9:46 PM, tin h wrote:
Hello gurus,
I made some slight progress...
If I specify a handlers section into the job_conf.xml file with:
handlers
handler id=main/
/handlers
Then galaxy would at least start. However, it is not very functional, I
Thank you Jennifer.
I am not sure if my previous email got gabled up...
Just to be sure, I specified the following in universe_wsgi.ini
default_cluster_job_runner = drmaa://-q default.q -V -v
TMPDIR=/scratch/
when i start galaxy, looking at the console log, this is what I see:
galaxy.jobs
Original Message
Subject: Re: how to add settings of TMPDIR=/scratch for sge/drmaa in
universe_wsgi.ini
Date: Tue, 13 Aug 2013 23:21:16 -0700
From: tin h tin6...@gmail.com
To: Jennifer Jackson j...@bx.psu.edu
CC: Galaxy Dev galaxy-...@bx.psu.edu
Thank you
Hello gurus,
I made some slight progress...
If I specify a handlers section into the job_conf.xml file with:
handlers
handler id=main/
/handlers
Then galaxy would at least start. However, it is not very functional, I
can't upload files or run job, it says:
An error occurred
Hi Tin,
I am going to move this over to the galaxy-...@bx.psu.edu mailing list
(good for local install questions) to give it better viability.
I am by no means the best person to help with this, so hopefully others
will jump in, but just from looking at this I am wondering if you
shouldn't
