[galaxy-dev] sysadmin help

2014-02-06 Thread Shrum, Donald C
I have a galaxy server set up, running off of our HPC cluster file system. I'd like to submit a simple job to test my settings with our moab scheduler. Could someone point me to the easiest possible example of uploading and running a job... possible an example a sysadmin with limited knowledge

Re: [galaxy-dev] sysadmin help

2014-02-06 Thread Eric Rasche
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 I believe there are select first and select last tools in the Text Utilites section (i.e., head and tail wrappers) you might try those... On 02/06/2014 01:37 PM, Shrum, Donald C wrote: I have a galaxy server set up, running off of our HPC cluster

Re: [galaxy-dev] sysadmin help

2014-01-29 Thread Nate Coraor
Hi Donny, Thanks for the heads up about the broken link, I've fixed it. Other than that, are you running in to problems connecting Galaxy to your existing cluster? --nate On Tue, Jan 28, 2014 at 9:29 PM, Shrum, Donald C dcsh...@admin.fsu.eduwrote: Hi all, I could use a little basic help.

[galaxy-dev] sysadmin help

2014-01-28 Thread Shrum, Donald C
Hi all, I could use a little basic help. I'm setting up a proof of concept galaxy server that will run in conjunction with our HPC here at FSU. Ultimately this will serve as a template where we will allow some users to run galaxy on a VM and use it as a mechanism for submitting/managing jobs