Re: [galaxy-dev] packaging R scripts

2016-02-28 Thread Björn Grüning
I will update this post with more informations as needed: https://biostar.usegalaxy.org/p/16259/ Thanks, Bjoern Am 26.02.2016 um 09:37 schrieb Gildas Le Corguillé: > Hi, > > For me, three solutions : > - You can find existing packages which will install your library > (https://testtoolshed.g2.

Re: [galaxy-dev] packaging R scripts

2016-02-28 Thread Björn Grüning
Hi Xianrong and Gildas, this method works, but is a little bit outdated. Please use the setup_r_environment like used here: https://github.com/galaxyproject/tools-iuc/blob/master/packages/package_deseq2_1_8_2/tool_dependencies.xml You can use this script with small modifications to create you su

Re: [galaxy-dev] Docker and alpine linux

2016-02-28 Thread Björn Grüning
Am 23.02.2016 um 10:13 schrieb Marius van den Beek: > Just my 2 cents about this: > I feel your pain, our connection to the docker hub is horrible, it takes > an hour to pull the GIE images ... . > (While it only takes seconds from the cloud ...). This is a Dockerhub related issue and we offer a