Hi Bjoern,
Thanks for your help.
Actually, every exon line has a transcript_id:
$ grep --color -i transcript_id dm6.gtf | wc -l
409159
$ wc -l dm6.gtf
409159 dm6.gtf
Paired fastq and fasta input files seems to be well formated too.
Cheers,
Sarah
INRA | SIGENAE | GenPhySE | INRA Occitanie-
Hi Sarah,
which GTF file are you using? Please make sure every exon line has a
transcript_id.
Cheers,
Bjoern
Am 25.11.19 um 10:53 schrieb Sarah Maman:
?Hello,
Please could you help me to run this wrapper : RNA STAR Gapped-read mapper for
RNA-seq data (Galaxy Version 2.7.2b)
without this
