Thanks for the bug report. I have fixed this problem here
(https://github.com/galaxyproject/planemo/commit/a32d0820a6b856d8d15c9619c97549230a17)
and released a new version of planemo (0.13.0) with fix. Hopefully you
will get a better error message after the upgrade if there is still a
Thanks,
now I get the following directly after the diff output:
Could not update stacks
object of type 'NoneType' has no len()
/usr/local/lib/python2.7/dist-packages/requests/packages/urllib3/connectionpool.py:768:
InsecureRequestWarning: Unverified HTTPS request is being made. Adding
Ay shit. Just realized during looking at it the third time:
Someone forgot to uncomment the key line o_o'
2015-06-29 16:21 GMT-05:00 Alexander Vowinkel vowinkel.alexan...@gmail.com
:
Here they are:
~/.planemo.yml: http://pastebin.com/nWdT6ybx
Command-Log: http://pastebin.com/baBmrD8d
Here they are:
~/.planemo.yml: http://pastebin.com/nWdT6ybx
Command-Log: http://pastebin.com/baBmrD8d
2015-06-29 15:23 GMT-05:00 John Chilton jmchil...@gmail.com:
Do you have a ~/.planemo.yml file? I think probably yes based on the
previous exception. Can you replace passwords and keys with
Do you have a ~/.planemo.yml file? I think probably yes based on the
previous exception. Can you replace passwords and keys with and
send me a copy of that as well as the command-line that produced the
above output?
-John
On Mon, Jun 29, 2015 at 12:05 PM, Alexander Vowinkel
Hi Alexander,
I have opend an issue:
https://github.com/galaxyproject/planemo/issues/240
Thanks for reporting,
Bjoern
Am 27.06.2015 um 07:11 schrieb Alexander Vowinkel:
Hi,
I'm running:
planemo shed_update --check_diff --shed_target toolshed
and get a python error message (see
Hi,
I'm running:
planemo shed_update --check_diff --shed_target toolshed
and get a python error message (see below).
shed_diff and shed_lint are working fine.
planemo, version 0.12.2
Best,
Alexander
Traceback (most recent call last):
File /usr/local/bin/planemo, line 11, in module
