[galaxy-user] Uses for Galaxy

Hi Galaxy Users, I'm very new to galaxy and have read/watched MANY galaxy tutorials but I have some questions for other users out there: What are the top 10 ways that you find most useful for your analysis, especially to those who work with whole genome sequencing data? Thanks for your help

[galaxy-user] Uploading Illumina BAM files in Galaxy

Dear Galaxy Users, I had a quick question as a new Galaxy user. I just received WGS data from Illumina where I'm given .bam files. I am not given .fastq files. Most of the Galaxy tutorials I've seen online have started with raw data in .fastq format. Can Galaxy handle if I were to upload a

Re: [galaxy-user] History items remain pending (grey color)

things are moving almost instantaneously. Thanks for your insight! Best, Priya From: Jennifer Jackson [j...@bx.psu.edu] Sent: Tuesday, March 26, 2013 12:14 PM To: Priya Bhatt Cc: galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] History items remain

[galaxy-user] History items remain pending (grey color)

Dear Galaxy Users, Forgive me in advance, but I am a VERY new Galaxy user! I am trying to go through the Galaxy 101 tutorial provided on the galaxy website (https://main.g2.bx.psu.edu/u/aun1/p/galaxy101). The first step asks to get exon data of Chromosome 22 from UCSC database, and the second