RE: [gmx-users] restraints or constraints over two molecules

2008-04-04 Thread Eric Jakobsson
ost (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemist

Re: [gmx-users] analysis of POPC

2008-02-04 Thread Eric Jakobsson
rch/category.php?category=shopping>Find them fast with Yahoo! Search. ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting

Re: [gmx-users] problem with npt

2007-12-16 Thread Eric Jakobsson
/users.php - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Computational Biology Senior Research Scientist, National Center for Supercomputing Applications Professor, Beckman Institute for Advanc

Re: [gmx-users] membrane protein

2007-12-16 Thread Eric Jakobsson
cs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php ----- Eric Jakobsson, Ph.D. Professor, Department

Re: [gmx-users] Gel Phase in DMPC using Berger force field ??

2007-12-12 Thread Eric Jakobsson
challenging...but yes, as you said, would be interesting... Cheers, Jochen Eric Jakobsson wrote: Several points: What is called the Berger force field was actually developed by See-Wing Chiu in our lab and presented in a 1995 paper. The Berger et al paper tested this force field against another

Re: [gmx-users] Gel Phase in DMPC using Berger force field ??

2007-12-11 Thread Eric Jakobsson
p://www.gromacs.org/mailing_lists/users.php - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Computational Biology Senior Research Scientist, National Center for Supercomputing Applications Professor,

Re: [gmx-users] Implicit solvent simulation

2007-07-18 Thread Eric Jakobsson
acs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.p

Re: [gmx-users] Compile Gromacs for Blue Gene/L

2007-04-08 Thread Eric Jakobsson
As I understand it, Blue Matter is a very stripped down laboratory code, so I think the scaling is the only large virtue that one would want to acquire. At 02:06 AM 4/7/2007, you wrote: Eric Jakobsson wrote: Not a direct response but a thought: Wouldn't it be wonderful to have a code

Re: [gmx-users] Compile Gromacs for Blue Gene/L

2007-04-06 Thread Eric Jakobsson
(un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php ----- Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Bioch

Re: [gmx-users] query about making a pdb file

2007-04-01 Thread Eric Jakobsson
t to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php ----- Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Computational Biology

Re: [gmx-users] Surface Tension of a lipid bilayer

2006-12-02 Thread Eric Jakobsson
interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php ----- Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Comp

[gmx-users] hydrocarbon force fields

2006-09-20 Thread Eric Jakobsson
lease don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology

[gmx-users] job opportunity

2006-09-18 Thread Eric Jakobsson
Eric - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Computational Biology Senior Research Scientist, National Center for Supercomputing Applications Professor, Beckman Institute for Advanced Scienc

Re: [gmx-users] seperating bilayers (again)

2006-04-12 Thread Eric Jakobsson
#x27;t post? Read http://www.gromacs.org/mailing_lists/users.php - Eric Jakobsson, Ph.D. Professor, Department of Molecular and Integrative Physiology, and of Biochemistry, and of the Center for Biophysics and Computational Biology Senior Research Scientist, Nationa