[gmx-users] Movements of secondary structure

Dear all, I have been trying to calculate and plot the secondary structure of helix movements during the simulation on time through g_helix, g_helix orient, g_principle and g_mindist but none of them shown the helix movements. Is there any other tool can elaborate the helix movements ? Plz

Re: [gmx-users] Movements of secondary structure

On 1/17/13 7:37 AM, 라지브간디 wrote: Dear all, I have been trying to calculate and plot the secondary structure of helix movements during the simulation on time through g_helix, g_helix orient, g_principle and g_mindist but none of them shown the helix movements. Is there any other tool can

Re: [gmx-users] Movements of secondary structure

Please use an appropriate subject line and delete irrelevant parts of the digest. On 1/17/13 8:42 PM, 라지브간디 wrote: Dear Justin, For example, In hemoglobin (A-H helix), the particular E and F helix gets moved during the MD simulation, I would like to calculate this helix