Re: [gmx-users] a plot technique question

That's probably a free-energy plot, made by some tool that works like g_sham. Every structure can be projected onto the coordinates of the underlying 2D histogram. Mark On Thu, Mar 21, 2013 at 10:42 AM, Albert wrote: > Hello: > > I've finished a replica exchange simulation and I would like to

[gmx-users] a plot technique question

Hello: I've finished a replica exchange simulation and I would like to make a plot like: http://ars.els-cdn.com/content/image/1-s2.0-S1093326303002006-gr4.jpg I am just wondering how can associate your energy (the red/white color) with 2D XY plot in the above figure? thank you very much