Or g_sdf
Catch ya,
Dr. Dallas Warren
Department of Pharmaceutical Biology and Pharmacology
Pharmacy and Pharmaceutical Sciences, Monash University
381 Royal Parade, Parkville VIC 3010
dallas.war...@pharm.monash.edu.au
+61 3 9903 9167
-
When the only tool you own is
g_sorient returns the number of solvent molecules within a given
distance range of a protein -- it may be what you are looking for.
Matt
2009/4/5 Morteza Khabiri :
> Dear gmxusers
>
> I want to calculate the density of solvent around protein.
> I already tried the commands g_density and g_densmap
Dear gmxusers
I want to calculate the density of solvent around protein.
I already tried the commands g_density and g_densmap but the results are
not the the things that I want. The g_density Compute partial densities
across the box and g_densmap just give me one black and white photo which
don't
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