[gmx-users] grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_empdb.tpr

I typed this command: grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_em.tpr It responded to me like this:Invalid command line argument: speptide_empdb.tpr I am a new -learner.Can you tell me where the problem is. Thanks. ___

Re: [gmx-users] grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_empdb.tpr

huifang liu wrote: I typed this command: grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_em.tpr It responded to me like this:Invalid command line argument: speptide_empdb.tpr I am a new -learner.Can you tell me where the problem is. Backslashes are used to escape

Re: [gmx-users] grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_empdb.tpr

On 8/16/2007 9:53 AM, Mark Abraham wrote: huifang liu wrote: I typed this command: grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_em.tpr It responded to me like this:Invalid command line argument: speptide_empdb.tpr I am a new -learner.Can you tell me where the problem

[gmx-users] grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_empdb.tpr grompp -f em.mdp -c speptide.pdb -p \#spetide.top.1#\ -o speptide_empdb.tpr

On top of Mark's point, many programs in GROMACS uses suffix to determine the file type. To use those files with name beginning #, you shall remove the leading and trailing # in the filename by renaming. In some cases you may not want to rename a file. In this case you can use a symbolic