RE: [gmx-users] Regarding lipid bilayer

2013-10-08 Thread Kukol, Andreas
And apparently you have only 6438 atoms in system_inflated.gro. So that is the source of the error. >-Original Message- >From: gmx-users-boun...@gromacs.org [mailto:gmx-users- >boun...@gromacs.org] On Behalf Of hasthi >Sent: 08 October 2013 05:56 >To: gmx-users@gromacs.org >Subject: [gmx-

Re: [gmx-users] Regarding lipid bilayer simulation

2013-10-06 Thread Justin Lemkul
On 10/6/13 12:47 AM, hasthi wrote: Dear GROMACS users, I have been trying to simulate protein of my interest in lipid bilayer(POPC) . I am following the tutorial of KALP-15 in DPPC. When I try to minimise the system after generating system_inflated.gro. I get a