[graph-tool] segmentation fault in PyInit_libgraph_tool_generation () at graph_generation.cc:99

2015-01-22 Thread graph-tool
Hi, using the latest git (or the release version), I get a segfault: $/usr/bin/python3.3 -c 'import graph_tool.all as gt' ; tail -n 1 /var/log/messages Segmentation fault Jan 19 04:42:12 localhost kernel: [196711.282646] python3.3[18903]: segfault at 16ae16 ip 0016ae16 sp 72286a

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread Tiago de Paula Peixoto
On 22.01.2015 18:42, malwanain wrote: import graph_tool > Fatal Python error: PyThreadState_Get: no current thread > Abort trap: 6 It looks like you are using a different python interpreter than the one which was used to compile graph-tool. Beware that macports and homebrew both install diffe

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread malwanain
Hi Again another problem, I've solved the previous problem and I got something else which is: >>> import graph_tool Fatal Python error: PyThreadState_Get: no current thread Abort trap: 6 Any one face same problem? Best -- View this message in context: http://main-discussion-list-for-the-gr

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread Tiago de Paula Peixoto
On 22.01.2015 15:50, malwanain wrote: > Thank, > > just quick question, does this tool graph-tool able to check the isomorphism > of graphs which written in .dot(graphviz) which produced from other tool? Yes. Best, Tiago -- Tiago de Paula Peixoto signature.asc Description: OpenPGP digital s

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread malwanain
Thank, just quick question, does this tool graph-tool able to check the isomorphism of graphs which written in .dot(graphviz) which produced from other tool? -- View this message in context: http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/problem-in-import-graph-

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread Tiago de Paula Peixoto
On 22.01.2015 15:03, malwanain wrote: > Yes, I did install graph-tool using macports. This problem occur when > the installations done. Then why did you link to the install instructions with homebrew? > Please let me know What king of information do you want me to provide you? You can send the f

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread malwanain
Thanks Yes, I did install graph-tool using macports. This problem occur when the installations done. Please let me know What king of information do you want me to provide you? -- View this message in context: http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/probl

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread Tiago de Paula Peixoto
On 22.01.2015 14:43, malwanain wrote: > I'm using OS X Yosemite, Python 2.7.9, and Boost Version 1.57.0. In terms of > the installations, I followed the instructions in here > and here > . I can't vouch for

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread malwanain
Hi Tiago I'm using OS X Yosemite, Python 2.7.9, and Boost Version 1.57.0. In terms of the installations, I followed the instructions in here and here . Regards M -- View this message in context: http:

Re: [graph-tool] problem in import graph-tool

2015-01-22 Thread Tiago de Paula Peixoto
On 22.01.2015 12:44, malwanain wrote: > Hi > > I've installed graph-tool and when I try to import it, I get the following > message: > import graph_tool > Traceback (most recent call last): > File "", line 1, in > File "graph_tool/__init__.py", line 101, in > dl_import("from . import

[graph-tool] problem in import graph-tool

2015-01-22 Thread malwanain
Hi I've installed graph-tool and when I try to import it, I get the following message: >>> import graph_tool Traceback (most recent call last): File "", line 1, in File "graph_tool/__init__.py", line 101, in dl_import("from . import libgraph_tool_core as libcore") File "graph_tool/dl_

Re: [graph-tool] A paper using graph-tool published in Nature!

2015-01-22 Thread Tiago de Paula Peixoto
Hi Guillaume, This is awesome! Very nice work. Congratulations! Best, Tiago On 22.01.2015 10:55, Guillaume Gay wrote: > Hi every one, > > I've been working for some time now with the graph-tool library as a > basis for the simulation of cellular tissue (aka epithelium), and this > work has final

[graph-tool] A paper using graph-tool published in Nature!

2015-01-22 Thread Guillaume Gay
Hi every one, I've been working for some time now with the graph-tool library as a basis for the simulation of cellular tissue (aka epithelium), and this work has finally been published in the review Nature. As the library was instrumental in having the model up and running quickly, I thought