Re: [gmx-users] Box size problem

2017-03-15 Thread Justin Lemkul
On 3/15/17 3:09 PM, Davit Hakobyan wrote: Dear All, I try to run a simulation with protein-membrane system in charmm36 ff with Gromacs5.0.4 and the simulation runs without complain.The problem is in the unit cell size which seems to grow during a short 500 ps simulation from ~15 to ~28 nm in Z

[gmx-users] Box size problem

2017-03-15 Thread Davit Hakobyan
Dear All, I try to run a simulation with protein-membrane system in charmm36 ff with Gromacs5.0.4 and the simulation runs without complain.The problem is in the unit cell size which seems to grow during a short 500 ps simulation from ~15 to ~28 nm in Z direction although the system atoms rema