thank you sir,for your suggestion.yes the error was because of version mismatch.
On 6/12/18, Justin Lemkul wrote:
>
>
> On 6/12/18 9:31 AM, SHAHEE ISLAM wrote:
>> hi,
>> i am following this tutorial
>> http://cgmartini.nl/index.php/tutorials-general-introduction/proteins.
>> afrter converting
On 6/12/18 9:31 AM, SHAHEE ISLAM wrote:
hi,
i am following this tutorial
http://cgmartini.nl/index.php/tutorials-general-introduction/proteins.
afrter converting the coarse grained protein to all atom structure by
charmm force field,i have gotten the all atom gro file.now i want to
analyse
The index group contains only residue based protein.
On Jun 12, 2018 7:38 PM, "Soham Sarkar" wrote:
> Do you have any allien group in your structure? If you have, then remove
> that by indexing.. As per my understanding DSSP is very much residue
> specific. Probably cannot read anything but
Do you have any allien group in your structure? If you have, then remove
that by indexing.. As per my understanding DSSP is very much residue
specific. Probably cannot read anything but the biomolecules.
On Tue, 12 Jun 2018, 7:01 pm SHAHEE ISLAM, wrote:
> hi,
> i am following this tutorial
>
hi,
i am following this tutorial
http://cgmartini.nl/index.php/tutorials-general-introduction/proteins.
afrter converting the coarse grained protein to all atom structure by
charmm force field,i have gotten the all atom gro file.now i want to
analyse the secondary structure of thih gro file.
when
