Hi Ely,
The PSQI Component scores are already available in ConnectomeDB. We don't have
plans to release the MMSE component scores.
Best,
Jenn
Jennifer Elam, Ph.D.
Scientific Outreach, Human Connectome Project
Washington University School of Medicine
Department of Neuroscience, Box 8108
660 So
News from the Human Connectome Project (HCP)
March 2, 2018
The Human Connectome Project (HCP) WU-Minn consortium is pleased to announce
the release of all SNP Genotypes collected for HCP-Young Adult (HCP-YA)
subjects on dbGaP:
Mapping the Human Connectome - Structure, Function, and Heritability:
enough, you
>>>> can dilate the volume ROI a few mm first.
>>>>
>>>>
>>>>
>>>> Tim
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> On Fri, Feb 23, 2018 at 11:18 AM, Glasser, Matthew
&g
gion-of-interest? approach
>>because
>> > the study groups sizes are less than a hundred, not in the thousands
>> > typical of the HCP grantwork. So we still have to contend with the
>> > statistical power limitations inherent in any ROI approach. It would
>>be
>> &
iption in the Data Dictionary. We will
> > fix the data dictionary with the upcoming data release of the
> > corrected 7T fMRI data slated to occur within the month.
> >
> >
> > Here's the full description for the Words in Noise measure from the
> >
0 dB S/N, with lower scores indicative of
> better performance and, conversely, higher scores potentially
> suggestive of hearing difficulties. For score interpretation with ages
> 13 and above, a cutoff of 10 dB S/N is recommended for the Toolbox
> version of this measure. Participants with a score
versely, higher scores potentially
> suggestive of hearing difficulties. For score interpretation with ages
> 13 and above, a cutoff of 10 dB S/N is recommended for the Toolbox
> version of this measure. Participants with a score higher than this
> cutoff should follow up with a hearing
cutoff suggested here is slightly higher
> than other published versions of this test because other versions were
> conducted in quieter environments.
>
> Again, sorry for the oversight. Let me know if you have further questions.
>
> Best,
> Jenn
>
>
> J
Google finds this:
https://www.mail-archive.com/hcp-users@humanconnectome.org/msg01081.html
Matt.
On 3/2/18, 1:06 PM, "Kwan-Jin Jung" wrote:
>Hi Matthew,
>
>Thank you.
>It is a long list:
>linux-vdso.so.1 => (0x7ffece4f)
>libz.so.1 => /usr/local/lib/libz.so.1 (0x7fafe4dd
Hi Matthew,
Thank you.
It is a long list:
linux-vdso.so.1 => (0x7ffece4f)
libz.so.1 => /usr/local/lib/libz.so.1 (0x7fafe4dd9000)
libcrypt.so.1 => /lib/x86_64-linux-gnu/libcrypt.so.1
(0x7fafe4ba1000)
libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x7fa
Well you will actually have to run the command on the file to get a
meaningful output. Sometimes FreeSurfer has shell wrappers for binaries,
so you’ll need to be sure that isn’t the case for mris_make_surfaces, but
I don’t think it is.
Peace,
Matt.
On 3/2/18, 12:58 PM, "Kwan-Jin Jung" wrote:
Hi Matthew,
jung@FileServer:~/bin/HCP/Examples/Scripts$ ldd mris_make_surfaces
ldd: ./mris_make_surfaces: No such file or directory
Kwan-Jin Jung, Ph.D.
S230J, HMRC, Life Science Laboratories
UMASS Amherst
Office: 413-577-0538
Website: http://www.umass.edu/ials/hmrc
-Original Message
On Ubuntu 14.04 what happens if you do ldd mris_make_surfaces?
Peace,
Matt.
On 3/2/18, 12:41 PM, "Kwan-Jin Jung" wrote:
>Hi Matthew,
>
>Since the FreeSurfer HCP version is available for MacOS, I assumed that
>the HCP pipeline is supported in MacOS.
>
>The problems with Ubuntu (both 16.04 and 1
Hi Matthew,
Since the FreeSurfer HCP version is available for MacOS, I assumed that the HCP
pipeline is supported in MacOS.
The problems with Ubuntu (both 16.04 and 14.04) were about the missing
libraries during mris: Libnetcdf.so.6 error during mris_make_surfaces.
This was resolved by followi
I¹m not sure we support the HCP Pipelines on Mac OS X. You definitely
need to be using a bash interpreter.
What issues were you having on Ubuntu?
Peace,
Matt.
On 3/2/18, 10:13 AM, "hcp-users-boun...@humanconnectome.org on behalf of
Kwan-Jin Jung" wrote:
>Hi,
>
>After I failed to run FreeSurf
Hi,
After I failed to run FreeSurfer pipeline on both Ubuntu and Centos, I tried it
on MacBook.
It runs without library issues, but it seems to have differences in shell
scripting commands.
The first example is ‘cp’ which needs to be replaced into ‘rsync’ in both
FreeSurferHiresWhite.sh and F
wb_command -cifti-merge contains this functionality, rather than a
separate command.
Peace,
Matt.
On 3/2/18, 6:47 AM, "hcp-users-boun...@humanconnectome.org on behalf of A
R"
wrote:
>Dear HCP users,
>
>How to split/trim a dtseries or ptseries file by number of time points?
>Basically an equiva
Dear HCP users,
How to split/trim a dtseries or ptseries file by number of time points?
Basically an equivalent of fslroi...
Thanks for any info
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Hi, Jennifer,
That's great, thanks for the clarification!
Best,
Robert
Am 01/03/2018 um 18:26 schrieb Elam, Jennifer:
Hi Robert,
Thank you for pointing us to this problem. The HCP Words in Noise
score is indeed the NIH Toolbox Words in Noise (WIN) Test computed
score, rather than the Tool
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