To Whom It May Concern,
I am interested in using ICA-FIX resting-fMRI data from HCP. Given that ICA-FIX
functions to denoise the data by removing high frequency noise, do you
recommend bandpass filtering the rs-fMRI data (0.01- 0.1 Hz) that has already
gone through ICA-FIX before running any a
Hi
> On 6 Feb 2019, at 18:08, Anita Sinha wrote:
>
> To Whom It May Concern,
>
> I am interested in using ICA-FIX resting-fMRI data from HCP. Given that
> ICA-FIX functions to denoise the data by removing high frequency noise,
It's not explicitly doing this. The pre-filtering removes just
Hey HCP community
When Freesurfer 6.0 is implemented into the HCP Pipeline, are there plans to
use the subcortical segmentation script outputs (amygdala and thalamus mgz
files) into cifti space (column 3)?
If so will they be an addition to the current ROI atlas or will they be
separate?
Tha
Others in the literature have looked into how slow-4 (0.027-0.073 Hz) and
slow-5 (0.01-0.027 Hz) oscillations in rs-fMRI data change between populations.
Would you then recommend that unless we are looking at specific frequency bins
within resting-state, we should not bandpass filter the rs-fMRI
It’s better to remove structured noise with ICA-based techniques, and we really
essentially are only detrending HCP data. For unstructured noise, this will
not affect regression-based analyses much, but will affect correlation
analyses. I’d recommend parcellating your data to reduce unstructur
Dear HCP users,
I registered to the HCP web. I installed what was needed following the pdf
documentation. I also have firefox as my browser but when I tried to
download the tutprial dataset it says me "forbidden"
Any idea why this is happening and how to solve it?
Yours sincerely,
Rosalia
_
I don’t see these being generated in our current test FreeSurfer 6.0 runs. How
are they generated?
Matt.
From:
mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of "Sanchez, Juan (NYSPI)"
mailto:juan.sanc...@nyspi.columbia.edu>>
Date: Wednesday, February 6, 2019 at 12:56 PM
To: "hcp-u
Did you agree to the "open access" data use terms before trying to
download? The tutorial dataset is covered by these terms, but maybe it
doesn't make this obvious.
Tim
On Wed, Feb 6, 2019 at 5:31 PM Rosalia Dacosta Aguayo
wrote:
> Dear HCP users,
>
> I registered to the HCP web. I installed
Dear Experts,
I'm interested in using the script DTIV1_to_Workbench.sh as described in the
HCP course materials, but I don't want to have to download the entire course VM
to get it. Is there a way of making that script available on GitHub or on the
HCP web site? Note that it also requires Whole
