[HCP-Users] Diffusion Preprocessing

2015-06-18 Thread levi solomyak
w how to fix this kind of issue? I would be happy to provide my script for reference. Thank you so much! Levi Solomyak ___ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users

[HCP-Users] Diffusion Preprocessing Error

2015-06-19 Thread levi solomyak
w how to fix this kind of issue? I would be happy to provide my script for reference. Thank you so much! Levi Solomyak ___ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users

Re: [HCP-Users] Diffusion Preprocessing

2015-06-23 Thread levi solomyak
ght help to determine > if the "ERROR: could not open file" being reported by the imcp command is > because it cannot find the file that it is supposed to copy or because it > cannot open/create the file it is supposed to be creating as a copy. > > Thanks, > Tim >

[HCP-Users] Cifti to gifti conversion

2015-11-11 Thread LEVI SOLOMYAK
Dear All, I am working with a cifti dlabel.nii file. I'm attempting to use those labels to create ROI's but i need those files to be in gifti. I have tried various ways of doing this with no success. I have been relying on the following two commands: wb_command -cifti-label-to-roi wb_command -cif

Re: [HCP-Users] Cifti to gifti conversion

2015-11-12 Thread LEVI SOLOMYAK
M, Donna Dierker > wrote: > >> I use wb_command -cifti-separate for this purpose. >> >> >> On Nov 11, 2015, at 10:52 AM, LEVI SOLOMYAK < >> ly...@scarletmail.rutgers.edu> wrote: >> >> > Dear All, >> > >> > I am working with a

[HCP-Users] qdec error

2015-11-19 Thread LEVI SOLOMYAK
Dear experts, I've been attempting to generate a stats data table in qdec, but each time I get a "Index Error: list index is out of range" error. This is occurring when it is trying to parse the .stats file. I've made sure that the files all line up exactly and that SUBJECTS_DIR is properly so

[HCP-Users] Qdec questions

2015-11-25 Thread levi solomyak
Dear experts, I've been attempting to generate a stats data table in qdec, but each time I get a "Index Error: list index is out of range" error. This is occurring when it is trying to parse the .stats file. I've made sure that the files all line up exactly with the qdec table and that SUBJECTS_