[HCP-Users] Coordinate of CIFTI files

2013-08-07 Thread Huang Su-Chun
Hello HCP teams, Thank you for all the hard works you did. I have some questions about the coordinate of CIFTI files. I read the online material and it mentioned that there are node index (for surface), voxel index (for volume), and an XYZ coordinate. My questions is that what space the voxel ind

Re: [HCP-Users] Coordinate of CIFTI files

2013-08-07 Thread Timothy Coalson
The volume space that should be used to turn the indices into an XYZ location is in the Volume XML element, which in cifti 1.0 is a child of the Matrix element (ignore the "TransformedSpace" attribute, we don't use it or set it to anything different depending on the space). The meaning of the XYZ

Re: [HCP-Users] Coordinate of CIFTI files

2013-08-07 Thread Glasser, Matthew
nconnectome.org" <hcp-users@humanconnectome.org> Subject: Re: [HCP-Users] Coordinate of CIFTI files The volume space that should be used to turn the indices into an XYZ location is in the Volume XML element, which in cifti 1.0 is a child of the Matrix element (ignore the "Transformed

Re: [HCP-Users] Coordinate of CIFTI files

2013-08-07 Thread Glasser, Matthew
e. Peace, Matt. From: Huang Su-Chun <claire0...@gmail.com> Date: Wednesday, August 7, 2013 6:40 PM To: Matt Glasser <glass...@wusm.wustl.edu> Cc: Timothy Coalson <tsc...@mst.edu>, "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: Re: [HCP

Re: [HCP-Users] Coordinate of CIFTI files

2013-08-08 Thread Huang Su-Chun
don't know what you are trying to do. > > Peace, > > Matt. > > From: Timothy Coalson > Date: Wednesday, August 7, 2013 4:11 PM > To: Huang Su-Chun > Cc: "hcp-users@humanconnectome.org" > Subject: Re: [HCP-Users] Coordinate of CIFTI files > > The volum

Re: [HCP-Users] Coordinate of CIFTI files

2013-08-08 Thread Stamatios Sotiropoulos
n , "hcp-users@humanconnectome.org" > > Subject: Re: [HCP-Users] Coordinate of CIFTI files > > Thank you very much for the answers, it helps a lot. > > What I want to do is to create dense connectome matrix (which mentioned in > the paper "The mini