Re: [Jmol-developers] Changing bond angle

2013-09-17 Thread Robert Hanson
no such script exists that I know of, but you can certainly write one yourself -- atoms can be moved, measurements can be made... On Tue, Sep 17, 2013 at 4:26 AM, scamiolo wrote: > > Hi there, > I am preparing some video for teaching organic reaction mechanisms. I need > to transform a sp3 hybr

[Jmol-developers] Changing bond angle

2013-09-17 Thread scamiolo
Hi there, I am preparing some video for teaching organic reaction mechanisms. I need to transform a sp3 hybridized carbon to sp2 hybridization. In facts a carbon atom is bound to 4 different groups with bond angles which are around 109°. One of the substituents leaves the molecule and the carbon i

Re: [Jmol-developers] bug in Java applet? JSmol 13.2.4 and 13.3.4

2013-09-17 Thread Jaime Prilusky
use HTML5, on Mac 10.8.5, both Safari 6.0.5 and Chrome 29.0.1547.65 fail when loading a local file. See here the last three lines in console: Jmol applet jmolApplet0_object__431989276316017__ ready call loadScript jsmol\core\corescript.z.js Jmol._readyCallback failed TypeError: 'null' is not an o