Re: [Jmol-users] RotateSelected

2007-06-13 Thread pim schravendijk
I think that Bob puts the documentation online the moment a functionality is in the newest code. Actually, all software documentation should be like this, don't you think? Therefore, try to get the prerelease (at 11.1.48 now so still to old) or get the code via SVN and build it, that should

Re: [Jmol-users] The future of Java?

2007-06-13 Thread pim schravendijk
On 6/13/07, Angel Herraez [EMAIL PROTECTED] wrote: I understood that iPhone uses plain MacOSX, so how is Java prevented from working? Do they block installation? What happens with other plugins, like Flash? Can't the browser be supplemented? If it is true that he puts MacOSX in mobile phone,

Re: [Jmol-users] jmol and overlay data

2007-06-13 Thread Raphael A. Bauer
Angel Herraez wrote: Tell me what you think of this: http://biomodel.uah.es/angel/RaphaelBauer/mapping.htm 1. wow.. thanks for that quick answer in html form! 2. wow.. simply yet elegant solution to my problem! 3. arg.. i should have thought about that earlier myself..! combining points 1.-3.

Re: [Jmol-users] RotateSelected

2007-06-13 Thread Bob Hanson
Michael, We are within days of releasing 11.2, and that is why the documentation got a bit ahead of us. Just go to the download page and select 11.1.48 Bob Hanson [EMAIL PROTECTED] wrote: Hello, I tried to use the RotateSelected function, but it doesn't work. In the documentation I found a

Re: [Jmol-users] jmol and overlay data

2007-06-13 Thread Bob Hanson
Raphael, this is an intriguing question. Keep talking about what sort of mapping you might imagine. What characteristics are important to you? - the mapping is visible for all atoms at once? or - the mapping is visible for an atom if the mouse is picked? for instance. Let me demonstrate with

Re: [Jmol-users] Polyhedra with 12 or 20 vertices

2007-06-13 Thread Dean Johnston
OK, I see that the POLYHEDRA command is really overkill for what I'm trying to do. I could essentially create my own polyhedral representations if the DRAW command was extended to allow the drawing of planes with an arbitrary number of vertices so that I could create triangles, pentagons, etc. as

Re: [Jmol-users] Polyhedra with 12 or 20 vertices

2007-06-13 Thread Bob Hanson
Dean Johnston wrote: OK, I see that the POLYHEDRA command is really overkill for what I'm trying to do. I could essentially create my own polyhedral representations if the DRAW command was extended to allow the drawing of planes with an arbitrary number of vertices so that I could create

Re: [Jmol-users] The future of Java?

2007-06-13 Thread Alan Hewat
Jobs also confirmed that iPhone won't support Java. Does even Safari for Windows support Java ? I couldn't get jmol to work with Safari on my Windows-XP ThinkPad and Safari wouldn't run at all on my old Win-2000 Dell. If you think that i-phone is important, or any of the other i-marketing

Re: [Jmol-users] The future of Java?

2007-06-13 Thread Dean Johnston
I could get some relatively simple Java applets to run on Safari/WinXP, but not Jmol. All the reports I've read say Safari on Windows is pretty unstable, but I don't know what Java support it's supposed to have. Dean On 6/13/07 2:51 PM, Alan Hewat [EMAIL PROTECTED] wrote: Jobs also confirmed

Re: [Jmol-users] Polyhedra with 12 or 20 vertices

2007-06-13 Thread Dean Johnston
On 6/13/07 12:38 PM, Bob Hanson [EMAIL PROTECTED] wrote: Yes, but don't hold your breath. It isn't core Jmol to be drawing random objects. If you really want to do it with Jmol, think about ways you can do it yourself with Jmol and triangles/quadrilaterals, and you will get there faster. You

[Jmol-users] [ANN] iBabel

2007-06-13 Thread drc
The new version of iBabel now uses Jmol 11. iBabel is a free MacOSX application that acts as a front-end to OpenBabel and ChemSpotlight that uses Jmol as one of the possible structure viewers. More info at http://www.macinchem.org/ Regards Chris