Re: [Jmol-users] applet size and set pickCallback

2008-01-04 Thread Herráez Sánchez Angel
Steve, percent-sized div should work, even in Ohio, but there may be browser issues limitng it, if I remember correctly. Check out the code of my templates http://biomodel.uah.es/Jmol/resizable/ I had to set html {height:100%} and body {height:100%} for this to work properly in all browsers;

[Jmol-users] Small buglet in saving graphics state (Jmol 11.4)

2008-01-04 Thread Brian McMahon
Hello If one invokes the Jmol console (at least in 11.4RC1) and clicks the State button, among the contents one finds function _setSelectionState(); select ({0:48}); set hideNotSelected false; end function Note that the final end function does not have a closing semicolon. This is

Re: [Jmol-users] Continuous Symmetry Measures - A new website

2008-01-04 Thread Herráez Sánchez Angel
Inbal, I suggest that you add your site to the list existing at Jmol Wiki http://wiki.jmol.org:81/index.php/Websites_Using_Jmol winmail.dat- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R)

Re: [Jmol-users] Interactive 3D Organic Reaction Mechanisms

2008-01-04 Thread Rzepa, Henry
Dear Jmol users, I would like to draw to your attention a new site I have developed using Jmol (with much help from many of you, especially Bob) to depict interactive 3D animations for some of the most important organic reactions covered during an undergraduate degree with supporting information

Re: [Jmol-users] Interactive 3D Organic Reaction Mechanisms

2008-01-04 Thread Nick Greeves
Hi Henry, Thanks for your kind comments. I see what you mean about the antarafacial nature of the ozonolysis. I had not intended to imply any antara/suprafacial aspect to the 3D arrows but like you I think this could be used specifically to stress this important aspect perhaps by using a

Re: [Jmol-users] Small buglet in saving graphics state (Jmol 11.4)

2008-01-04 Thread Robert Hanson
thank you - please enter as an official request for a bug fix. Perhaps Egon can find that code in SelectionManager.java and fix it for us. On Fri, 4 Jan 2008 15:50:11 +, Brian McMahon [EMAIL PROTECTED] wrote: Hello If one invokes the Jmol console (at least in 11.4RC1) and clicks the

Re: [Jmol-users] minimum Jmol download

2008-01-04 Thread Robert Hanson
On Wed, 2 Jan 2008 21:02:59 -0500, Frieda Reichsman [EMAIL PROTECTED] wrote: Bob, two part question: 1, Which component files of Jmol will download when a page has an applet displaying one structure (DNA only), in wireframe only, with NO buttons or other controls? (Assuming I am using the

Re: [Jmol-users] something broken in Jmol states (?)

2008-01-04 Thread Robert Hanson
looks like a missing semicolon after color selectionHalos none If you can fix that manually for now, that will make it work. [[Egon, can you fix this? It's in org/jmol/shapes/Halos.Java 62 public String getShapeState() { 63 return super.getShapeState() 64 + (colixSelection

Re: [Jmol-users] polyhedra bonds opaque broken

2008-01-04 Thread Robert Hanson
please enter as a request for a bug fix; in the mean time, please use color polyhedra opaque :) On Wed, 2 Jan 2008 19:05:49 +0100, Paul Pillot [EMAIL PROTECTED] wrote: Happy new year to all Jmolers ! I think there is something broken in respect with polyhedra translucency : polyhedra bonds