Are you serving these XYZ files from a web server? If so, is it
possible to get the web server to set a Cache-Control header for the
XYZ files, so they're never cached? Under Apache, you'd need
something like the following in .htaccess:
Header append Cache-Control "no-cache"
Just an idea...I'
OK, so in case this is useful to anyone in the future, I will post here what I
have achieved.
The idea is to a have a custom text displayed on hovering the mouse pointer
over the
atoms, and that custom text is restricted to and specific for certain atoms.
(By default, hover text can be set usin
right. atomIndex
2009/4/2 Angel Herraez
> Thanks, Bob
>
> > well, you can do whatever you want with the callback, right? If you
> > want to know if an atom is in a certain set, I think you could use:
> >
> > if ({whateverSet} and {atomno=_atomHovered})
>
> Yes, I am already following that line -
I don't know if this will work for your situation, but I use a Firefox
extension called Web Developer (
https://addons.mozilla.org/en-US/firefox/addon/60). It adds a toolbar that
allows you to temporarily disable the cache (along with many other useful
features).
Dean
2009/4/2 Angel Herraez
>
Thank you, Nico, for releaseing Jmol 11.7.31. This release includes a bunch
of minor bug fixes and a few new features.
new features:
# new feature: MO no longer restricted to one per model set; rather, one per
MODEL
# new feature: MO command operates on all models in current frame set:
# for in
Hello Benjamin
Your problem is probaly related to the "Java cache" in the browser.
This a browser-specific problem, per user.
You can fix it by manually clearing the Java cache before each
reload. There are instructions in the Jmol Wiki, Running Jmol,
Troubleshooting:
http://wiki.jmol.org:81/i
Bonjour benjamin,
peux-tu expliquer comment tu rafraichis la page web ? Est-ce que tu
utilises les commandes de script de Jmol pour charger ce nouveau
fichier ? Ou est-ce un rechargement complet de la page ?
Paul
Le 2 avr. 09 à 15:23, benjamin liagre a écrit :
Hi,
I am a french student in
I also would welcome such a feature.
"3 Search all of PDB, for that spatial arrangement of residues"I think the
EBI's Tempura does something similar or identical:
Tempura is a server that allows for specific templates to be generated from
a submitted structure. These templates can then be scanned
As more of an "implementor" and end-user than a developer I would
agree that yes, this would be strongly welcomed! CCSDs ReLiBase does
this, but again that is far from user friendly or open source (and
ReLiBase+ is exorbitantly priced)
Good luck,
Tom
On Apr 2, 2009, at 7:23 AM, Chris Lars
All,
I am attempting to write up a structure biology proposal for the
NIH...and just trying to establish JMol capabilities here.
Would you al agree that the following function does not exist in Jmol?
1 Select residues in a protein's catalytic group
2 Note positions relative to each other
3 Sea
Hi,
I am a french student in an engineering school which is specialized in computer
science and I am going to create a web site to show phonon's effects.
I have a problem and I don't find the solution:
I have a file (file.xyz) and I load it in the Jmol Applet. Until now, there is
Thanks, Bob
> well, you can do whatever you want with the callback, right? If you
> want to know if an atom is in a certain set, I think you could use:
>
> if ({whateverSet} and {atomno=_atomHovered})
Yes, I am already following that line -and have a working test-.
It is atomindex, not atomno,
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