Re: [Jmol-users] Problem with Test2.htm MOUSE VS COMMANDS

2014-04-14 Thread Eric Martz
MOUSE The disappearance has something to do with rotation by mouse. I can zoom just fine with mouse. Rotation commands into the Console, e.g. 'rotate y 90' work just fine, as does 'spin on'. But the moment (or soon after) you start rotating with the mouse, caffeine disappears. I can load 1d6

Re: [Jmol-users] Problem with Test2.htm

2014-04-14 Thread Robert Hanson
It's a general problem I recently introduced. Will be ok for next release. reset gets it back. On Sat, Apr 12, 2014 at 9:10 PM, Otis Rothenberger wrote: > Bob, > > I've been working with a late March version of JSmol for a while, so I > have not checked this page recently: > > http://chemap

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Robert Hanson
Try upgrading to Jmol 14.0. On Sun, Apr 13, 2014 at 5:06 PM, Eric Martz wrote: > I cannot seem to get the JSmol menu to open (14.0.4): > > http://firstglance.jmol.org/fg.htm?mol=1d66&use=html5 > > For comparison, the menu opens just fine with the Java applet: > > http://firstglance.jmol.org/fg.h

Re: [Jmol-users] Hydrogen in water bug

2014-04-14 Thread Robert Hanson
thanks. Got it. Will put out a version tonight. On Sun, Apr 13, 2014 at 6:25 PM, Eric Martz wrote: > Dear Bob, > > Current Jmol does not recognize the hydrogen in water as belonging to > water. As The hydrogens are in 'hoh' but not in 'water'. > > This bug appears to have crept in between 14.0.1

Re: [Jmol-users] Problem with Test2.htm MOUSE VS COMMANDS

2014-04-14 Thread Robert Hanson
thanks all; it's a change I made in the mouse rotation algorithm. Simple fix. On Mon, Apr 14, 2014 at 12:29 PM, Eric Martz wrote: > MOUSE > > The disappearance has something to do with > rotation by mouse. I can zoom just fine with > mouse. Rotation commands into the Console, e.g. > 'rotate y 90

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Eric Martz
Hi, Bob, As stated below, I am already using 14.0.4 in the released version of FirstGlance 1.98 (firstglance.jmol.org, uncheck the Java checkbox and enter a PDB code). Also when I use 14.0.13 (running in Firefox from local files) I can't get the menu to open. Regards, Eric At 4/14/14, Robert

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Robert Hanson
Right, sorry. Looked at the wrong line: Jmol Version: 14.0.4 2014-01-05 16:16: java.vendor: j2s java.version: JSmol 13.3.9 11/23/2013 10:51:10 PM On Mon, Apr 14, 2014 at 6:56 PM, Eric Martz wrote: > Hi, Bob, > > As stated below, I am already using 14.0.4 in the released version of > FirstGlan

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Robert Hanson
Anyway, that's still quite old. We are up to 14.0.13. On Mon, Apr 14, 2014 at 7:13 PM, Robert Hanson wrote: > Right, sorry. Looked at the wrong line: > > Jmol Version: 14.0.4 2014-01-05 16:16: > java.vendor: j2s > java.version: JSmol 13.3.9 11/23/2013 10:51:10 PM > > > > > On Mon, Apr 14, 2014

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Robert Hanson
Let's see what we can find here: jmolApplet0._applet.viewer.global.disablePopupMenu true so something happened there. That flag is set in viewer: private Object getPopupMenu() { if (jmolpopup == null) { jmolpopup = (allowScripting ? apiPlatform.getMenuPopup(menuStructure, 'j') : nul

Re: [Jmol-users] JSmol menu doesn't open in FirstGlance

2014-04-14 Thread Robert Hanson
Eric, make sure you have both newer JSmol.min.js and j2s directory. On Mon, Apr 14, 2014 at 7:30 PM, Robert Hanson wrote: > Let's see what we can find here: > > > jmolApplet0._applet.viewer.global.disablePopupMenu > true > > so something happened there. That flag is set in viewer: > > private

[Jmol-users] jmol-14.1.14_2014.04.14.zip

2014-04-14 Thread Robert Hanson
http://chemapps.stolaf.edu/jmol/zip/jmol-14.1.14_2014.04.14.zip corrects a few bugs, including problems recently reported with mouse action and structure disappearing, problems starting Jmol.jar, and a few other items. Looking at a release of Jmol 14.0.14/14.1.14 later this week possibly. Bob -

[Jmol-users] Jmol.setInfo

2014-04-14 Thread Otis Rothenberger
Bob, Is there a way to turn off error reporting to the Jmol.setInfo screen? Otis -- Otis Rothenberger o...@chemagic.com http://chemagic.com -- Learn Graph Databases - Download FREE O'Reilly Book "Graph Databases" is