Sorry, I copied the wrong piece of code in my former reply. This is the correct
way:
Hello, Huan
You are in the right drection.
> Actually, I found a very brief introduction in Jmol Wiki website, where
listed some commands for loading PDB file and
> running script in command line. Howeve
Am 19.12.16 um 18:13 schrieb Rolf Huehne:
> Am 19.12.16 um 16:37 schrieb Huan Wang:
>> Dear Jmol developers and users,
>>
>> I am a newbie to Jmol and I have a question on running Jmol in Linux
>> command line.
>>
>> Previously, when I prepared Ramachandran plot, I used Jmol interface to
>> open PD
Am 19.12.16 um 16:37 schrieb Huan Wang:
> Dear Jmol developers and users,
>
> I am a newbie to Jmol and I have a question on running Jmol in Linux
> command line.
>
> Previously, when I prepared Ramachandran plot, I used Jmol interface to
> open PDB file and typed command in Jmol console as:
> /wri
Hello, Huan
You are in the right drection.
> Actually, I found a very brief introduction in Jmol Wiki website, where
> listed some commands for loading PDB file and
> running script in command line. However, I did not see any command for saving
> data.
Not specifically to save data, but it'
Huan,
You can add a line to your .profile or your .bashrc to recognize an alias to
run Jmol.
For example, on my mac, I have edited my .profile to include:
alias jmol144="java -jar /Applications/jmol-14.4.0_2015.12.02/Jmol.jar”
This line means that typing jmol144 opens Jmol.
Note that if you a
Dear Jmol developers and users,
I am a newbie to Jmol and I have a question on running Jmol in Linux
command line.
Previously, when I prepared Ramachandran plot, I used Jmol interface to
open PDB file and typed command in Jmol console as:
*write ramachandran "OUTPUT_FILE_NAME"*
That was very low
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