Re: [Jmol-users] 11.6 release -- DONE!

2008-10-09 Thread Steven R. Spilatro
Congratulations to everyone for the release of 11.6. It's uses and impact will be increasing steadily. On a personal note, thanks for adding features that I have inquired about, and for the periodic help in using Jmol. Steve Dr. Steven R. Spilatro Department of Biology and Environmental

[Jmol-users] jmolGetPropertyAsJavaObject(image)

2008-09-24 Thread Steven R. Spilatro
= jmolGetPropertyAsString(image) In FF, in either case, x will yield the image when assigned to an img such as src= data:image/jpeg;base64,'+ x + '. The data:image/jpeg;base64 is required for both. Steve Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College

[Jmol-users] Scripting documentation lost also

2008-09-15 Thread Steven R. Spilatro
with Jmol related links. I couldn't find any new link to the documentation at www.jmol.org. Regards, Rolf Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email is sponsored

[Jmol-users] Placing Jmol image in same web page

2008-09-10 Thread Steven R. Spilatro
with jmolGetPropertyAsJavaObject(image), but no luck yet. Steve Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest

[Jmol-users] Placing Jmol image in same web page

2008-09-09 Thread Steven R. Spilatro
://www.marietta.edu/~spilatrs/MnQuiry/JmolDemo/jmolImgCopy.html (Also; for some reason our server sometimes sends a 'java.security.AccessControlException: access denied ' warning when a Jmol applet page is opened, which goes away with a page refresh) Steve Dr. Steven R. Spilatro Department

[Jmol-users] Dynamic base64 decoding

2008-09-09 Thread Steven R. Spilatro
variable to any memory-constrained length, but you are asking for something different, I think. Bob Would a feature like testimg.src=jmolGetImage (jpeg) involve similar contraints? Steve Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College

[Jmol-users] Dynamic base64 decoding -- legible

2008-09-07 Thread Steven R. Spilatro
image that could be dynamically added to the open web page: something like: testimg.src=jmolGetImage (jpeg)? (Have I just fully revealed my lack of understanding of JAVA, or, is this already possible and I have once again missed it in the documentation?) Thanks! Steve Dr. Steven R. Spilatro

[Jmol-users] Dynamic base64 decoding

2008-09-07 Thread Steven R. Spilatro
;base64, + jmolGetPropertyAsString('image'); var B64path=base64.php testimg.src = B64path + ? + imgB64; } Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email

[Jmol-users] background color and jmolGetPropertyAsString(image);

2008-09-05 Thread Steven R. Spilatro
that jmolGetPropertyAsString(image) fires before the color change -- even if I build in a delay such as: setTimeout(myImage = jmolGetPropertyAsString(image),1); or jmolScript(color background white; delay 5); I'm using jmol-11-6-RC12. Is there a solution? Steve Dr. Steven R. Spilatro Department of Biology

[Jmol-users] Branch within problem persists

2008-08-29 Thread Steven R. Spilatro
something obvious, but further help would be appreciated. Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge

[Jmol-users] branch within problem resolved

2008-08-29 Thread Steven R. Spilatro
appreciate all of your work and readiness to help us users. Steve Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email is sponsored by the Moblin Your Move Developer's

[Jmol-users] branch option problem

2008-08-25 Thread Steven R. Spilatro
appreciated. Thanks. Steve Dr. Steven R. Spilatro Department of Biology and Environmental Science Marietta College - This SF.Net email is sponsored by the Moblin Your Move Developer's challenge Build the coolest Linux based applications

[Jmol-users] atom dragging, etc

2008-03-31 Thread Steven R. Spilatro
, is possible now with a bit of JavaScript, it will be interesting to see what people come up with. We have drag mode for drawn points, so perhaps an extension of that would work with atoms. But I could imagine some sort of sculpt mode coming out of this. We'll see. Bob Dr. Steven R. Spilatro Chair

[Jmol-users] new site launched

2008-02-06 Thread Steven R. Spilatro
the window position. Thanks for the clarification -- it's working now. Thanks also for the heads-up on the scroll bar and formatting issues at low resolution, which has been largely resolved some mozilla issues notwithstanding. Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta

[Jmol-users] applet size and set pickCallback

2008-01-02 Thread Steven R. Spilatro
, the applet must be within a fully qualified div; however, the div height must be set to a px value; setting height to a percent value does not work -- at least in Ohio. Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] 11.3.62 atom-picking dead

2007-12-21 Thread Steven R. Spilatro
Bob, Assuming that atom-picking has not been deprecated, it no longer seems to be working in 11.3.62. Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College - This SF.net email is sponsored

[Jmol-users] pitch for wireframerotation

2007-12-12 Thread Steven R. Spilatro
Bob, Thanks so much. It'll be put to good use. Steve On Dec 11, 2007, at 12:50 AM, Bob Hanson wrote: make that Jmol 11.3.55 set wireframeRotation Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] wireframerotation resurrection?

2007-12-10 Thread Steven R. Spilatro
I saw in the archives a query about the status of wireframerotation and that is has be discontinued. It would be a wonderful educational tool. Any chance of revival? Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] pitch for wireframerotation

2007-12-10 Thread Steven R. Spilatro
- of the model changing into wireframe while rotated. ** Dr. Steven R. Spilatro Chair, Department of Biology Marietta College - SF.Net email is sponsored by: Check out the new

[Jmol-users] passing values to javascript

2007-12-05 Thread Steven R. Spilatro
difficulty in getting this to work. Thanks. Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College - SF.Net email is sponsored by: The Future of Linux Business White Paper from Novell. From the desktop

[Jmol-users] Jmol 11.3.15 -- custom menus

2007-09-11 Thread Steven R. Spilatro
portion of the users. Adding the simplified menu option also, in effect, further complicates the standard menu. As an alternative suggestion, custom menu script developed by users could be submitted (with a brief description) and posted somewhere for other to cut and paste. Steve Dr. Steven R

[Jmol-users] callback for draw object id?

2007-07-03 Thread Steven R. Spilatro
Hi all, Is there a callback that returns the id of a draw object (line, e.g.)? I would like to be able to click on a line and retrieve its id number. If not, might this function be developed? Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] How to export images

2007-02-07 Thread Steven R. Spilatro
Embarrassing question: How does one export images (e.g., jpg, etc)? I've seen reference to an export command in the 'File' menu -- but I can't find this. Thanks Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] image flash with moveto

2006-12-11 Thread Steven R. Spilatro
to reorienting and apply the spacefill command. It's really distracting when switching between models. Is this a bug or otherwise avoidable? Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] DNA properties

2006-07-01 Thread Steven R. Spilatro
of elimination (bases do not contain * or P) seems simpler. I'm good! Steve Dr. Steven R. Spilatro Chair, Department of Biology Marietta College Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job

[Jmol-users] DNA properties

2006-06-29 Thread Steven R. Spilatro
://lists.sourceforge.net/lists/listinfo/jmol-users End of Jmol-users Digest, Vol 1, Issue 1153 *** Dr. Steven R. Spilatro Chair, Department of Biology Marietta College Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly

[Jmol-users] Group selection

2006-06-28 Thread Steven R. Spilatro
-- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users End of Jmol-users Digest, Vol 1, Issue 1152 *** Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] Group selection

2006-06-26 Thread Steven R. Spilatro
would like to know if the user has clicked on the base. Along a similar line... if 'set picking GROUP' is enabled, can the group selected by the user be returned through a callback (I haven't seen that it is.). Thanks. S. Spilatro Dr. Steven R. Spilatro Chair, Department of Biology Marietta

[Jmol-users] installing jmolappletproto.jar: resolution

2006-06-07 Thread Steven R. Spilatro
the capitalization exact in the file name, right? That's been problems for some people, because your hard drive will accept jmolappletproto.jar for JmolAppletProto.jar but the web server won't. Bob Steven R. Spilatro wrote: Bob, Oh, I guess I was confused because it appears as jmolappletproto.jar

[Jmol-users] jmolappletproto.jar: resolution

2006-06-07 Thread Steven R. Spilatro
manager, menu Tools, Folder options, View tab, uncheck Hide file extensions for known file types Check whether your downloaded file (on the right-hand panel; don't open it while in the left panel) has or not an extension. Dr. Steven R. Spilatro Chair, Department of Biology Marietta College

[Jmol-users] jmolappletproto.jar: resolution

2006-06-07 Thread Steven R. Spilatro
] jmolappletproto.jar: resolution To: jmol-users@lists.sourceforge.net Message-ID: [EMAIL PROTECTED] Content-Type: text/plain;charset=iso-8859-1 On Wed, June 7, 2006 1:54 pm, Steven R. Spilatro wrote: Angel, 1) XP with Service pack 2 2) no compression file installed, other than that which comes with windows

[Jmol-users] installing jmolappletproto.jar

2006-06-06 Thread Steven R. Spilatro
) -- -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users End of Jmol-users Digest, Vol 1, Issue 1129 *** Dr. Steven R. Spilatro Chair, Department of Biology