On Wednesday, May 04, 2011 10:47:26 PM Christopher Walker wrote:
Hello,
We have a user who is trying to post-process HDF files in R. Her script
goes through a number (~2500) of files in a directory, opening and
reading the contents. This usually goes fine, but occasionally the
script dies
Hello,
We have a user who is trying to post-process HDF files in R. Her script
goes through a number (~2500) of files in a directory, opening and
reading the contents. This usually goes fine, but occasionally the
script dies with:
HDF5-DIAG: Error detected in HDF5 (1.9.4) thread
On Wed, 2011-05-04 at 16:47 -0400, Christopher Walker wrote:
Hello,
We have a user who is trying to post-process HDF files in R. Her script
goes through a number (~2500) of files in a directory, opening and
reading the contents. This usually goes fine, but occasionally the
script dies
try mounting the lustre filesystem with -o flock or -o localflock
On Thu, May 5, 2011 at 4:47 AM, Christopher Walker
cwal...@fas.harvard.edu wrote:
Hello,
We have a user who is trying to post-process HDF files in R. Her script
goes through a number (~2500) of files in a directory, opening
Hi Larry,
Everything below is with the filesystem mounted with localflock.
This does indeed look a lot like the bug referred to by David Dillow
(thanks!)
Chris
On 5/4/11 10:05 PM, Larry wrote:
try mounting the lustre filesystem with -o flock or -o localflock
On Thu, May 5, 2011 at 4:47 AM,
