Re: [Mauve-users] New install not working - Bad CPU type in executable.

2015-03-23 Thread Cox K.
Hi Aaron, I¹m on OS X Mavericks and yes I¹d previously disabled the security option for the apps, however the snapshot works perfectly so thanks! Thanks also for the updated url. Best wishes Karen On 24/03/2015 2:59 pm, "Aaron Darling" wrote: >Hi Karen, > >I presume you're running this on a

Re: [Mauve-users] New install not working - Bad CPU type in executable.

2015-03-23 Thread Aaron Darling
Hi Karen, I presume you're running this on a Mac? What version of the OS are you running, and have you adjusted the security settings to allow unsigned applications to run? Mauve 2.3.1 was released before OS X became stingy about requiring apps to be cryptographically signed. You might try the cur

[Mauve-users] New install not working - Bad CPU type in executable.

2015-03-23 Thread Cox K.
Hi, I’ve just downloaded MAUVE to align some assemblies created in MaSuRCA but I keep getting the following error: - Error running aligner. java.io.IOException: Cannot run program: “Volumes/Mauve 2.3.1/mauve.app/Contents/MacOS/progressiveMauve”: error=8, Bad CPU type in executable Has anyone

Re: [Mauve-users] Extract core alignment in fasta format from Mauve output

2015-03-23 Thread Peter Hoyt
Hello Lu and everyone, This is an old thread, but it would help me a lot if we could core extract an alignment in fasta format from the stripSubsets core_alignment.xmfa file. Using 6 aligned genomes, and following Lu's instructions exactly, I am getting 6 error messages: MAUVE>perl xmfa2fas