Hi Dan,
When the reorderer module runs, it creates a series of folders called
alignmentN inside the chosen output location. These contain successive
runs of the reordering algorithm, which continues either until the
contig ordering converges or a defined limit on the number of iterations
is reache
I am a student at the University of Pittsburgh who is trying to export a
multiple-contig genome sequence from Mauve into a .gbk, .fasta, or other
file type that can be used for annotation.
I reordered the contigs of our sequence to match a reference sequence but
haven't been able to export (or cop
