Hi Aleksander,
There appears to be a bug in the SNP exporter, wherein it fails to
write the last part of the output. I have just committed a fix to the
source code repository:
https://sourceforge.net/p/mauve/code/4736/
I also posted a copy of the updated jar file into a repository for an
unrelated
Hi Annalisa
It isn't unusual for this to run for a week. As long as you aren't
getting any errors, it's probably working.
Peter
On 06/08/2016 6:29 AM, annalisa giampetruzzi wrote:
Dear Prof. Aaron Darling and Mauve users,
I'm writing to you to ask some questions about the use of
progressive
Greetings Mauve community,
I have a small problem with extracting SNPs from our Mauve alignment.
We have a set of 50 genomes (same species but quite diverse). When extracting
SNPs
from s subset alignment (15 genomes) it works perfectly, but when I include all
genomes,
the output file remain
Dear Prof. Aaron Darling and Mauve users,
I'm writing to you to ask some questions about the use of
progressiveMauve.
The topic of my work is to do a whole genome phylogeny and analyze (by
ClonalOrigin) the recombination fluxes on a set of 27 whole genome
sequences of bacteria, but most of the
