Re: [melbourne-pug] help with importing fasta files nito command window (python)

2017-03-06 Thread Jessica Rose via melbourne-pug
yeah that pip command gives me trouble too! i really am a newbie at all this so sorry for seeming slow.  when i have my command window open (idle) what do i type in to import fasta from biopython? Jessica Rose, PhD PDF Department of MicrobiologyFaculty of MedicineTechnion, Haifa+972-52-378-1674

Re: [melbourne-pug] help with importing fasta files nito command window (python)

2017-03-06 Thread Tim Richardson
The module is not installed. Read pyfasta installation instructions. Usually it will be pip install pyfasta On Mon, 6 Mar. 2017, 21:57 Rory Hart, wrote: > Oh dear you've asked programmers about what text editor they prefer, let > the religious wars begin! > > I would suggest sublime 3 personall

Re: [melbourne-pug] help with importing fasta files nito command window (python)

2017-03-06 Thread Rory Hart
Oh dear you've asked programmers about what text editor they prefer, let the religious wars begin! I would suggest sublime 3 personally. It is straightforward to use out of the box and later you can install a bunch of plugins once you get a bit more advanced that can help your coding. I assume

Re: [melbourne-pug] help with importing fasta files nito command window (python)

2017-03-06 Thread William ML Leslie
On 3 March 2017 at 18:57, Jessica Rose via melbourne-pug wrote: > Hi there, I am having trouble with importing or reading text files (fasta > files) when writing code with python. I am very new to this and have been > practicing python code writing from the command window with great success. > but

[melbourne-pug] help with importing fasta files nito command window (python)

2017-03-06 Thread Jessica Rose via melbourne-pug
Hi there, I am having trouble with importing or reading text files (fasta files) when writing code with python. I am very new to this and have been practicing python code writing from the command window with great success. but the time has come for me to apply what i have learned to real files.