NCBO Seminar Series - Meeting Info for Wed, March 4!

2009-02-27 Thread Kanel, Shauna Bella
Hello All! The National Center for Biomedical Ontology is pleased to announce its next online Seminar Series on Wednesday, March 4th at 10am PST. This series aims to showcase new projects, technologies and ideas in biomedical ontology by featuring the work of a different collaborator each session

ARCOE-09 Final Call for Participation

2009-02-27 Thread ARCOE-09
Apologies for Multiple Postings === CALL FOR PARTICIPATION ARCOE-09 at IJCAI-09 July 11-12, 2009 Pasadena, CA, USA === The IJCAI-09 Workshop on Automated Reasoning about Context and Ontology Evolution (ARCOE-09) http://km.aifb.uni-karlsruhe.de/ws/ARCOE-

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Erick Antezana
Kei, would it be possible to get your slides? do you know if the material disucussed during the C-SHALS will be available? thanks, Erick > I gave the following neuroscience URI examples in my biordf talk at > C-SHALS yesterday. > > http://dbpedia.org/resource/Dopamine_receptor > http://purl.or

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Ward Blonde
Hi Andrea, I was playing as well with your system, actually at: http://biogw-db.hpc.ntnu.no:8892/sparql but the query: select ?x where { ssb:NCBI_4530 rdfs:label ?x . } Gets in timeout all the time. Shouldn't be such a pretentious query, I guess, even if you compute transitiveness.

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Chris Mungall
On Feb 26, 2009, at 7:03 PM, Kei Cheung wrote: I gave the following neuroscience URI examples in my biordf talk at C-SHALS yesterday. http://dbpedia.org/resource/Dopamine_receptor http://purl.org/ycmi/senselab/ neuron_ontology.owl#Dopaminergic_Receptor http://purl.org/nif/ontology/NIF-Mole

Identity of URIs. WAS: Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Andrea Splendiani
One thing that I think would be very useful, though it poses some semantic problem... is the possibility to assert equivalence in rdf. At the moment equivalence can be asserted only in owl (and this implies a distinction between individuals, properties, classes...). But that is a lower level

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Lee Feigenbaum
Slides from the C-SHALS HCLS tutorial(s) are available at: http://esw.w3.org/topic/HCLS/CSHALS2009/Tutorial Thanks to Susie for pulling everything together. Lee Kei Cheung wrote: I think the slides of the HCLS tutorial session at C-SHALS might be availlable to public. The C-SHALS organizers

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Andrea Splendiani
I guess this could be a good idea for ontology providers... ciao, Andrea Il giorno 26/feb/09, alle ore 05:38, Lee Feigenbaum ha scritto: andrea splendiani (RRes-Roth) wrote: Thanks! It'2 240M, but compressed is only 9. I wonder whether there is some architecture to transparently transfer c

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Andrea Splendiani
Hi, I didn't yet try to read it, but I'm not that worried about its size. I was just wondering that these ontologies representation files are extremely redundant, so compression would be a natural choice for their transfer. Although it is more of a perspective thinking, I don't think this is

RE: Re : Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread andrea splendiani (RRes-Roth)
Hi, thanks. But which is the difference between this, and using sparql on top of an inferential model ? Ciao, Andrea -Original Message- From: public-semweb-lifesci-requ...@w3.org [mailto:public-semweb-lifesci-requ...@w3.org] On Behalf Of Pierre LINDENBAUM Sent: 27 February 2009 10:02 To

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Kei Cheung
I think the slides of the HCLS tutorial session at C-SHALS might be availlable to public. The C-SHALS organizers (e.g., Susie) con confirm. If not, I can make my slides available through the BioRDF site. Thanks, -Kei Erick Antezana wrote: Kei, would it be possible to get your slides? do

Re : Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Pierre LINDENBAUM
Hi Andrea, this is not an answer to your query but you or others might be interested by this post I wrote a few monthes ago: http://plindenbaum.blogspot.com/2008/11/taxonomy-and-semantic-web-writing.html In this post I wrote an extension for arq/sparql returning all the descendants of a given