Re: HCLS blog

Very interesting pointers. I was wondering whether you know if the slides of the B2PM conference will be available? cheers, Erick On 7 June 2011 00:39, M. Scott Marshall wrote: > It occurred to me that many people don't read blogs. So, to bring an HCLS > blog to your attention: > > http://www.w

HCLS blog

It occurred to me that many people don't read blogs. So, to bring an HCLS blog to your attention: http://www.w3.org/blog/hcls/2011/04/01/semantic_web_japan_personalized_medicine I recently had the good fortune of being invited to give a keynote at the Japanese Semantic Web conference

Re: URI for MeSH

Helena, As you can see there are many options for MeSH but no official version. Another option is to use the SPARQL endpoint maintained by Stony Brook University Department of Medical Informatics for the public sources of the UMLS that have been converted to RDF. As MeSH is part of the UMLS y

LODD telcon on Wed at 11AM ET / 5PM CET

At the LODD telcon  this coming Wed, Anja Jentzsch will demonstrate the Silk Workbench http://www.assembla.com/spaces/silk/wiki/Silk_Workbench via screen sharing and using the Zakim teleconference bridge for audio as usual. Anja's presentation will be followed by a discussion of the W3C RDF practi

Re: URI for MeSH

Hello, The current MeSH release at http://mesh.bio2rdf.org/sparql is from this author [http://thesauri.cs.vu.nl/eswc06/] . The URIs have been rename to fit into the Bio2RDF URI naming scheme. The current endpoint is not up to date. As far as I know, there is no "official" RDF MeSH release. I'm c

RE: HCLS Mission Statement

I agree - SW is a good key word to add. I also think that we need to add 'scalable vocabulary and ontology' and 'rule-based' techniques into our mission statement. We have developed structural terms and ontology using such scalable and rule-based technique and it should be the long range goal fo

Re: URI for MeSH

Hi, It is the Bio2RDF's initiative that has converted MeSH into RDF and made it available at a SPARQL endpoint, more details here: http://www.freebase.com/view/en/mesh_medical_subject_headings/-/base/bio2rdf http://www.freebase.com/view/user/bio2rdf/public/sparql Regards, Amrapali J Zaveri http:/

Re: URI for MeSH

It does not look like there is an official mesh distribution in RDF at this time. http://www.nlm.nih.gov/mesh/filelist.html Regards, Jerven Bolleman On Mon, Jun 6, 2011 at 4:05 PM, Matt Vagnoni wrote: > Is this the official MeSH base uri? > > ...from phone > > On Jun 6, 2011 8:37 AM, "Amrapali

Re: URI for MeSH

Is this the official MeSH base uri? ...from phone On Jun 6, 2011 8:37 AM, "Amrapali J Zaveri" wrote: Hi, Here's an example URI for a MeSH term: http://bio2rdf.org/searchns/mesh/parkinson MeSH also has a SPARQL endpoint available at http://mesh.bio2rdf.org/sparql Hope that helps ! Regards, Amr

CfP: OBML 2011 (special focus: ontology of phenotypes)

Apologies if you received multiple copies of this mail. CALL FOR PAPERS --- OBML 2011 - 3rd Workshop on Ontologies in Biomedicine and Life Sciences Berlin, Germany -- October 6-7, 2011 Co-located with INFORMATIK 2011 Website: https://wiki.imise.uni-leipzig.de/Gruppen/OBML/Workshops

Re: URI for MeSH

Hi, Here's an example URI for a MeSH term: http://bio2rdf.org/searchns/mesh/parkinson MeSH also has a SPARQL endpoint available at http://mesh.bio2rdf.org/sparql Hope that helps ! Regards, Amrapali J Zaveri http://aksw.org/AmrapaliZaveri On Mon, Jun 6, 2011 at 1:35 PM, Helena Deus wrote: > H

URI for MeSH

Hi all, I am trying to identify a URI for a concept in MeSH; bioportal URI is http://bioportal.bioontology.org/ontologies/44776?p=terms&conceptid=D058885 But BioPortal gives me this very polite message: "We're sorry but something has gone wrong. We have been notified of this error." I've looked

CfP: SEMAPRO 2011 || November 20-25, 2011 - Lisbon, Portugal

== SEMAPRO 2011 | Call for Papers === CALL FOR PAPERS, TUTORIALS, PANELS SEMAPRO 2011: The Fifth International Conference on Advances in Semantic Processing November 20-25, 2011 - Lisbon, Portugal General page: http://www.iaria.org/conferences2011/SEMAPRO11.html Cal