Postdoc position - Bio-Ontologist (m/f)

2014-03-17 Thread Erick Antezana
*** Apologies for cross-posting *** The plant biotechnology Innovation center of Bayer in Gent is part of Bayer CropScience NV in Diegem. The Gent site now has 350 employees and is the most important research and development center of the Seeds division of the Bayer group. Bayer CropScience is a l

Re: The new Diseasecard

2013-03-08 Thread Erick Antezana
Hi Pedro, nice system! would it be possible to have the links in the hypertree with a head (i.e. arrows) and a legend on top of them? e.g. is_a, part_of cheers, Erick On 28 February 2013 17:11, Pedro Lopes wrote: > Hi all, > > At the university of Aveiro's bioinformatics group we have been pur

Re: Reminder: SysBio Wednesday 11AM ET / 4PM GMT / 5PM CET

2012-05-28 Thread Erick Antezana
[4] http://hcls.deri.ie/semantic-systems-biology/ On 28 May 2012 23:19, Michel Dumontier wrote: > I guess I do :) > > m. > > > On Tue, May 29, 2012 at 12:05 AM, Erick Antezana > wrote: >> >> so, do you define 'semantic systems biology' as "an

Re: Reminder: SysBio Wednesday 11AM ET / 4PM GMT / 5PM CET

2012-05-28 Thread Erick Antezana
so, do you define 'semantic systems biology' as "an interdisciplinary approach to create a more powerful modelling and validation framework..."? cheers, Erick On 28 May 2012 21:41, Michel Dumontier wrote: > My goal in pursing semantic systems biology is to i) see to what extent > model behaviour

Re: reasoning on gene ontology

2012-04-06 Thread Erick Antezana
on and what is your need for a database dump are also important > factors for us to decide on this. > > Thanks > > T N Bhat > > > -Original Message- > From: Erick Antezana [mailto:erick.antez...@gmail.com] > Sent: Friday, April 06, 2012 11:43 AM > To: Bh

Re: reasoning on gene ontology

2012-04-06 Thread Erick Antezana
Hi, is it possible to get the relational database schema you use? and a database dump? how often do you update your system? cheers, Erick On 6 April 2012 15:29, Bhat, Talapady N. wrote: > Hi, > > Because you mentioned about ontology (GO) in the context of relational > databases I thought you m

Re: Good news from the EBI Semantic Web Industry Workshop and LODD members

2011-09-29 Thread Erick Antezana
to those interested), so there are > firm connections between ebi & pistoia in the semantic area > > I think that answers all the questions I've seen Happy to talk to anyone > about thoughts/opportunities etc. Within Pistoia we're actively discussing > where the semantic

Re: HCLS blog

2011-06-06 Thread Erick Antezana
Very interesting pointers. I was wondering whether you know if the slides of the B2PM conference will be available? cheers, Erick On 7 June 2011 00:39, M. Scott Marshall wrote: > It occurred to me that many people don't read blogs. So, to bring an HCLS > blog to your attention: > > http://www.w

Re: Good news from the EBI Semantic Web Industry Workshop and LODD members

2011-05-25 Thread Erick Antezana
are the presentations/program somewhere available? was there any representative of a biotech company attending such workshop? is it somehow related to the Pistoia Alliance? cheers, Erick On 25 May 2011 00:56, M. Scott Marshall wrote: > Last week, Michel Dumontier, Matthias Samwald and I were i

Re: BioPortal 2.1 Release

2009-05-06 Thread Erick Antezana
Hi Trish, is it possible to have a local install of the BioPortal? cheers, Erick > The National Center for Biomedical Ontology is pleased to announce the > release of BioPortal 2.1. Highlights of this release are: > > -*Annotator*: a service that identifies mentions of biomedical ontology > con

Re: Is there an NCBI taxonomy in OWL ?

2009-02-27 Thread Erick Antezana
Kei, would it be possible to get your slides? do you know if the material disucussed during the C-SHALS will be available? thanks, Erick > I gave the following neuroscience URI examples in my biordf talk at > C-SHALS yesterday. > > http://dbpedia.org/resource/Dopamine_receptor > http://purl.or

Re: Is there an NCBI taxonomy in OWL ?

2009-02-25 Thread Erick Antezana
Hi Andrea, you can find an RDF at http://www.semantic-systems-biology.org/biogateway/resources#ncbi and play with it from: http://www.semantic-systems-biology.org/biogateway/querying I would also recommend taking a look at the work of Schulz et al: http://bioinformatics.oxfordjournals.org/c

Re: BioGateway

2008-11-03 Thread Erick Antezana
Eric, the SSB team clearly aims at collaborating around specific SB applications (such as therapeutic development). We (Ward, Mikel, I, and some others from the SSB team) will be at the SWAT4LS meeting (http://www.swat4ls.org/) next 28 Nov. Will you be there? We could perhaps take the oppo

Re: Join message

2008-07-10 Thread Erick Antezana
approaching all of this from the aerospace angle: http://heybryan.org/2008-05-09.html It's an email I sent to some presenters at ISDC2008 (since I couldn't attend), the National Space Society, OpenVirgle ( http://google.com/virgle (humor is healthy)), and even some Google Lunar X Prize t

Cell-Cycle Ontology: Release 0.5

2006-08-22 Thread Erick Antezana
Gene Ontology (OWL, XML and DOT) produced with the developed API. Best regards, Erick == Erick Antezana Tel: 32 (0) 9 3313824 DEPARTMENT OF PLANT SYSTEMS BIOLOGYFax:32 (0)9 3313809 GHENT UNIVERSITY/VIB,Technology Par