RE: A problem-oriented medical record OWL ontology

2007-01-10 Thread Forsberg, Kerstin L
Excellent, Vipul Looking forward to that, Chimezie Regards Kerstin

RE: A problem-oriented medical record OWL ontology

2007-01-09 Thread Kashyap, Vipul
Forsberg, Kerstin L > Sent: Tuesday, January 09, 2007 3:38 PM > To: public-semweb-lifesci@w3.org > Subject: RE: A problem-oriented medical record OWL ontology > > > Chimezie, > the clinical recording ontology you describe in the documentation > on the Wiki do look very interestin

RE: A problem-oriented medical record OWL ontology

2007-01-09 Thread Forsberg, Kerstin L
Chimezie, the clinical recording ontology you describe in the documentation on the Wiki do look very interesting: http://lists.w3.org/Archives/Public/public-semweb-lifesci/2006Dec/0002.html May I suggest that you walk us through the core of it, and your key learnings from developing it, in a sui

RE: A problem-oriented medical record OWL ontology

2007-01-07 Thread Chimezie Ogbuji
I've since updated this ontology (attached to the ESW Wiki) as well as the documentation on the Wiki. Currently, it aligns with GALEN (the more recent Open Galen model), Helen's OWL extract of the HL7 RIM, Barry Smith's Ontology of Biomedical Reality (OBR), DOLCE, and the KIF-based Laborator

RE: A problem-oriented medical record OWL ontology

2006-12-06 Thread Chimezie Ogbuji
On Wed, 6 Dec 2006, Kashyap, Vipul wrote: [VK] This reminds me of a discussion I had with Dan Russler and similar to the above sentiment, the design choices seem to be between one of the following: 1. Modeling the action of recording a clinical information; or ordering a drug; or making a dia

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread Chris Mungall
Thanks Bill - although I think you attribute too much to me here! I really haven't done much other than make some enquires about how one would represent content and content bearing entities within a realist ontological framework. As soon as I start working on this again I'll make contact

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread Trish Whetzel
This is a very informal effort Chris Mungall has been leading - and is directly related to the work he, NCI, OBI, BIRN, and others have been doing on a shared formalism for expressing ontology-associated metadata - or AnnotationProperties - or "speech acts" - depending on who you discuss the

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread William Bug
Hi Trish, This is a very informal effort Chris Mungall has been leading - and is directly related to the work he, NCI, OBI, BIRN, and others have been doing on a shared formalism for expressing ontology-associated metadata - or AnnotationProperties - or "speech acts" - depending on who yo

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread Trish Whetzel
There is also an informal effort underway in this same context for associating "speech acts" with the annotations, which relates both to the "acts" as represented in HL7 RIM and similar contextual qualifiers as represented in ontologies such as DOLCE & GALEN. Which effort is this? Trish

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread William Bug
Hi All, I would also add that the effort amongst OBO Foundry participants to create a Clinical Trials ontology (http://www.bioontology.org/wiki/ index.php/Workshop_on_Clinical_Trial_Ontology) is focussed on expressing (2) that Vipul highlights below. They are also looking to efforts such

RE: A problem-oriented medical record OWL ontology

2006-12-06 Thread Kashyap, Vipul
Hi Chimezie, I have just briefly looked through the introduction to your Problem Oriented Medical Record ontology and I find it very interesting. In the same way as HL7 RIM Acts has a "ontological failings" in mixing up the "concept of the action of recording clinical information and the phe

Re: A problem-oriented medical record OWL ontology

2006-12-06 Thread Forsberg, Kerstin L
Hi Chimezie, I have just briefly looked through the introduction to your Problem Oriented Medical Record ontology and I find it very interesting. In the same way as HL7 RIM Acts has a "ontological failings" in mixing up the "concept of the action of recording clinical information and the phenome

A problem-oriented medical record OWL ontology

2006-12-02 Thread Chimezie Ogbuji
During the teleconference before last we had decided to take a first shot at a W3C note on the problem statement for computer-based patient records. I had preferred that we develop literature with guidance towards solutions in this space as I think the problem statement is well defined (at l