On 11 July 2011 04:55, Helena Deus wrote:
> Hi,
> I am trying to find where the description of the genes in the GXA sparql
> endpoint can be found (in RDF to that it can be pulled into the query):
> SPARQLing GXA, I get a list of genes from an experiment; each gene looks
> something like this:
> "
Hi,
I am trying to find where the description of the genes in the GXA sparql
endpoint can be found (in RDF to that it can be pulled into the query):
SPARQLing GXA, I get a list of genes from an experiment; each gene looks
something like this: "
http://www.ensembl.org/Gene/Summary?g=ENSMUSG005
LSIG_BioRDF_Subgroup/MicroarrayExperimentContext.
cheers,
michael
> -Original Message-
> From: Helen Parkinson [mailto:parkin...@ebi.ac.uk]
> Sent: Friday, July 08, 2011 7:44 AM
> To: Michael Miller
> Cc: tomasz.adamus...@ebi.ac.uk; public-semweb-lifesci@w3.org
> Subject: Re: GXA triples
>
>
: public-semweb-lifesci-requ...@w3.org [mailto:public-semweb-
lifesci-requ...@w3.org] On Behalf Of Tomasz Adamusiak
Sent: Friday, July 08, 2011 3:57 AM
To: public-semweb-lifesci@w3.org
Subject: GXA triples
Hi,
[Resending as my original email seems to be lost in moderation.]
Jun has kindly
Biology
> -Original Message-
> From: public-semweb-lifesci-requ...@w3.org [mailto:public-semweb-
> lifesci-requ...@w3.org] On Behalf Of Tomasz Adamusiak
> Sent: Friday, July 08, 2011 3:57 AM
> To: public-semweb-lifesci@w3.org
> Subject: GXA triples
>
> Hi,
>
> [
Hi All,
Jun has kindly reloaded a new batch of Atlas triples that James and I
generated. In this release there are up to 500 top differentially
expressed genes per experiment available and a total number of triples
increased from ~37 to ~170 million.
More information is available at:
http://
Hi,
[Resending as my original email seems to be lost in moderation.]
Jun has kindly reloaded a new batch of Atlas triples that James and I
generated. In this release there are up to 500 top differentially
expressed genes per experiment available and a total number of triples
increased from ~37 t
fesci-requ...@w3.org] On Behalf Of Michael Miller
Sent: 09 June 2011 15:59
To: public-semweb-lifesci@w3.org
Cc: Jun Zhao; Tomasz Adamusiak; James Malone
Subject: GXA triples
hi all,
jun zhao has kindly hosted the initial go at triplifying the Gene Expression
Atlas (james' and tomasz' effor
data?
Cheers,
Lena
-Original Message-
From: public-semweb-lifesci-requ...@w3.org
[mailto:public-semweb-lifesci-requ...@w3.org] On Behalf Of Michael Miller
Sent: 09 June 2011 15:59
To: public-semweb-lifesci@w3.org
Cc: Jun Zhao; Tomasz Adamusiak; James Malone
Subject: GXA triples
hi all,
jun zha
Zhao; Tomasz Adamusiak; James Malone
Subject: GXA triples
hi all,
jun zhao has kindly hosted the initial go at triplifying the Gene Expression
Atlas (james' and tomasz' efforts)
http://www.open-biomed.org.uk/sparql/endpoint/gxa
> To access a UI for the SPARQL endpoint, please go to
Dear all,
Note that we also have a wiki page documenting some example SPARQL queries:
http://code.google.com/p/open-biomed/wiki/GeneExpressionAtlas
cheers,
Jun
On 09/06/11 15:58, Michael Miller wrote:
hi all,
jun zhao has kindly hosted the initial go at triplifying the Gene Expression
Atlas
hi all,
jun zhao has kindly hosted the initial go at triplifying the Gene Expression
Atlas (james' and tomasz' efforts)
http://www.open-biomed.org.uk/sparql/endpoint/gxa
> To access a UI for the SPARQL endpoint, please go to:
>
> 1. http://www.open-biomed.org.uk/sparql/query.html
> 2. and set pa
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