Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-05-02 Thread M. Scott Marshall
>>> [mailto:public-semweb-lifesci-requ...@w3.org] On Behalf Of Waard, Anita de >>>> A >>>> (ELS-AMS) >>>> Sent: 17 April 2011 21:57 >>>> To: Alexander Garcia Castro; Jodi Schneider >>>> Cc: barend mons; M. Scott Marshall; Tim Clark;

Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-05-02 Thread Joanne Luciano (gmail)
Hi, Regrets - I can't make the call today. Will be at Nano 2011: Medicine, Science, and Engineering (at RPI). On Apr 30, 2011, at 2:48 PM, Waard, Anita de A (ELS-AMS) wrote: > Dear all, > > We don't have a speaker for Monday but I propose whoever is interested does > dail in to discuss: > 1)

Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-30 Thread Waard, Anita de A (ELS-AMS)
Dear all, We don't have a speaker for Monday but I propose whoever is interested does dail in to discuss: 1) timeframe and names for ideas below 2) how close are we to fulfilling our original use cases? 3) overlap with other HCLS subgroups 4) in summary: next steps. Time & nrs as per usual - wil

RE: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-17 Thread Waard, Anita de A (ELS-AMS)
Dear all, Jodi's talk last week seemed to spur on a great amount of discussion, and this week, as we don't have a speaker, I would like to spend our time about the issues Jodi's talk brought up. These include: - Alex's points below - links between the paper and workflow and experimental ontolog

Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-12 Thread Jodi Schneider
Hi Alex, Thanks for the discussion! I talked about fine-grained ontologies not because we're making one, but to get a better understanding of what a "middle-grained ontology" should be, and how we can provide a bridge between the coarse-grained document structure and the fine-grained structures

DRAFT minutes -- Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-12 Thread Jodi Schneider
I wrote up draft "minutes" from our HCLS Scientific Discourse call yesterday. Please update & edit them on the wiki: http://www.w3.org/wiki/HCLSIG/SWANSIOC/Actions/RhetoricalStructure/alignment/mediumgrain#2011-04-14_HCLS_meeting Thanks for a fruitful discussion! -Jodi = Howard: It seems lik

Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-11 Thread sas
Hi Alex and all, > ..experimental information is highly domain specific and there are now ontologies (OBI) > and repositories for experimental information as well as efforts for standardizing > minimal amounts of information (http://www.mibbi.org/index.php/Main_Page) ... if you want to look/sear

Re: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-11 Thread Alexander Garcia Castro
Hi Jodi, nice talk. As a general question, shouldn't the description of experiments be something to be described by domain specific ontologies? Also, there are repositories for experiments, e.g Array express for microarrays; there are also minimal standards for reporting several experimental pro

RE: HCLS Scientific Discourse Call Monday, 11 April 2011 10 am EST, 3 PM BST: talk by Jodi Schneider

2011-04-10 Thread Waard, Anita de A (ELS-AMS)
Dear all, Monday's scientific discourse call will focus on an update of the medium-grained ontology alignment by Jodi Schneider: see agenda and call details below, or at http://www.w3.org/wiki/HCLSIG/SWANSIOC/Actions/RhetoricalStructure/meetings/20110411 Kind regards, Anita Anita de Waard Di