I see what the abbreviations mean now, so stands for small overlap, bo
for bad overlap, wc Van Der Wals contact, etc. They are at the left
side of King's GUI. Sorry that was a naive question.
Tom
Tom,
The simplest thing to do is just to use the dist command to check the
interactions manual
Thanks Bob. The kinemage generated by MolProbity is a good way to
locate H-bond and not only. I guess "hb" in the list of contacts
stands for H-bond, but I'm not quite sure what the other abbreviations
stand for (cc, wc, so, etc.). This is the first time I use MolProbity
and I've seen that
Hi Pymol users,
I want to display the polar interactions between some ligands and a
receptor, but I 'm not quite sure if Pymol can do that for F, Cl or S
atoms. There's a tutorial on the wiki that explains how to set the
cutoff distance but that refers only to O and N atoms:
http://www.py
Hi,
I have a problem - I can't seem to search your mailing list at sourceforge. I
can browse it, but any search I do, such as "ray" or "objects" turns up no
results. Is this an ongoing problem, or is it something my web browser might be
experiencing? I'm using Mozilla Firefox, and have tried t
