Re: [PyMOL] Sruface area (Dimer interface)

2010-05-17 Thread Thomas Holder
use the PISA web service, you can upload a PDB file there and get detailed summary for all interfaces in your complex. http://www.ebi.ac.uk/msd-srv/prot_int/cgi-bin/piserver Cheers, Thomas On Tue, 2010-05-18 at 14:02 +0900, humayun scherrif wrote: > > > > > I have tried to using the method

Re: [PyMOL] Sruface area (Dimer interface)

2010-05-17 Thread humayun scherrif
I have tried to using the method described in http://muralab.org/~cmura/PyMOL/ , but I want to calculate the Dimer Interface area as compared to total area of the Dimer On Tue, May 18, 2010 at 1:41 PM, Edward A. Berry wrote: > humayun scherrif wrote: > >> Hello, >> >> I was wondering if anyon

[PyMOL] Sruface area (Dimer interface)

2010-05-17 Thread humayun scherrif
Hello, I was wondering if anyone can tell me how to calculate the Dimer interface surface area ? Although I have seen related posts, but nothing work out well. Thanks -- Best Regards, Humayun Sharif -- __

[PyMOL] set up APBS in windows

2010-05-17 Thread sujuan wang
Hi, all I download APBS1.2.1bwin.zip,and release it. then run Apbs Tools in Pymol. after i choose the apbs binary location at /apbs-1.2.1/bin, there are some error as information following, I only find the install method for Linux, is there any way to set up apbs in Windows? OSError Exception in