I have the same problem since pymol 1.5, mainly with the hybrid (I can reach
10GB of ram memory with relatively small sessions). I'm on MAC OS 10.7.5 and
pymol version 1.5.0.3.
I had to renounce working with Hybrid unless I really need some plug-in.
Gianluigi
Hi grid bird,
the label command is parsed in literal mode, which means the semicolon
is not recognized as command separator. Try this instead:
/usr/bin/pymol -d 'fetch 1D5R, async=0; show_as cartoon; spectrum b;
select t0, (resi 30); color red, selection=t0; show spheres,
selection=t0; label t0,
Today I managed to get Coot (and Pymol etc) running under Linux in stereo.
Here is the setup for those that are interested:
For the stereophiles with a linux box,
System: Dell precision 3600 with nvidia quadro 2000 (no 3-pin connector)
Linux: Latest version of openSuse but we had to download
Hi Gianluigi and Martin,
thanks for reporting, this is a serious issue and we are looking into it.
As far as we can reproduce, it's related to the undo feature. Adding this to
your scripts should help:
cmd.set(suspend_undo, 1)
Cheers,
Thomas
On Dec 21, 2012, at 9:53 AM, Gianluigi
