[PyMOL] Cel shading in PyMOL

Hi all, Has anyone figured out a good way to do Cel shading in pymol? Or even the sort of variables to play with? Cheers, Jacob -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is off

[PyMOL] holes in isosurface representation

Hi all, I am using the maps and isosurface to represent a large protein protein complex, however whenever I generate a a map then isosurface it has holes in it areas that are not complete. I don’t understand as it surface representation it is a complete, closed surface? Anyone have any ideas a

[PyMOL] moving large flexible loops

Hi all, I am trying to crudely dock a protein into a complex, one protein contains a large loop region that clashes when docked and needs to be moved quite a distance. moving it using just individual atoms is extremely difficult and frustrating. Does anyone have a sensible solution to move res

[PyMOL] Goodsell colouring

Hi, I am trying to colour a protein which is a hexamer using the “goodsell” colouring method where by carbons are a light shade and all other atoms are a darker shade, however I want to colour alternating subunits of the hexamer for clarity. Is there a way of selecting two different carbon col