Dear Sebastien.
answer by just looking online. When I type commands which bring up
text in the viewer window how do i return the molecular image.
Just press the Esc key (escape). Be sure that the PyMOL viewer window
(the one with the molecule) is focussed/selected prior to pressing
escape (if
Hi Jack,
In all of the examples distributed with APBS, the pdie (solute dielectric)
The pdie must be the protein dielectric constant though the comment for
pdie in the pymol generated .in-file reads # Solute dielectric ...
that is probably a mistake. The APBS-plugin says Protein Dielectric.
The
Hi Sarma,
I can change the color of the surface to gray or a rainbow gradient
using the options but can't find a way to specify the residues that need
to be colored differently in a surface representation.
You most likely need to select the residues first. That will give you an
extra entry
Hi Grégori
I tried to exclude the load commands from my script, to pre-load the
structures, display them, be sure that no other windows were
overlapping the PyMol display window (I even placed the PyMol window
on another location on my screen!), and it didn't change anything. I
also tried
On Tue, 2005-03-22 at 14:09 -0500, Qun Wan wrote:
Hi, everyone:
If I want to select every cystein residues in my molecules,
I think this works:
select cysteins, resn Cys
Kind Regards,
./ Kristoffer
Douglas Kojetin asked the following question on February 9, 2005:
For example, the molecular surface numbers default to
-1, 0 and 1. If they are changed to -5, 0 and 5, the displayed surface
looks less charged than that displayed with the default numbers.
What do the numbers mean?
I'm not an
