Hi all,
I'm in the process of creating a plugin for pymol, however I've hit a
small wall. Is there a series of python calls I can make in my code to
perform a mutation without the loss of the original residue? I've tried
to follow the commands the wizard returns but I'm unable to follow what
Hi all,
While building another plugin, I needed a way to access the net through
our proxy and was unable to see any settings in pymol. So I wrote my
own config plugin. There is a small security flaw, the password is
saved by default as plain text (I'm currently looking into encrypting
the p
Hi all,
I've just finished the development of two new plugins and a modified
version of the PDB loader plugin (now with proxy support). A proxy
configuration plugin and a nsSNP loader plugin.
The proxy plugin stores in a pickled file whether the user connects
directly to the web or through
Also try Modeller: http://www.salilab.org/modeller/
Cheers
Noel
ge...@embl-grenoble.fr wrote:
Hi all ...
I'm not sure weather the pymol mailing list is the best place to ask this but
anyway ...
I would like model a structure of a protein. I have a sequence of interest and I
have a related struc
Hi all,
Recently I finally managed to install the Nvidia driver
(NVIDIA-Linux-x86-1.0-7182-pkg1) for the graphics card (Quadro2 Pro/AGP/SSE2)
on my Fedora Core 5 box. When I try and run pymol it crashed after I load a
pdb file and try and either right or left click on the main display.
Here i
Hi Siv,
Try giving each chain a unique identifier. As pymol might believe that all
the fragments belong to chain ' '.
Cheers
Noel
On Wednesday 23 August 2006 22:40, Siv Midtun Hollup wrote:
> Hi,
>
> Hope this is the correct place for this question :)
>
> I have a pdb file with many small fr
/home/fauxn/software/pymol/pymol: line 14: 10660
Aborted $PYMOL_PATH/pymol.exe "$@"
Dose anyone have any idea's? This occurs when I single click left or right in
the main display.
On Tuesday 22 August 2006 13:46, Noel Faux wrote:
> Hi all,
>
> Recently I f
Hi all,
As suggested by Peter, I tried compiling PyMol from src
(pymol-0_99rc6-src.tgz). Unfortunately it fell over :(
Attached is the output.
The error occurs in layer0/Crystal.c. I've look at the file in vim and there
does not seem to be anything untowards (weird characters etc...) in it.
Hi all,
On Wednesday 30 August 2006 23:54, Peter Adrian Meyer wrote:
> Which version of gcc are you using?
gcc (GCC) 4.1.1 20060525 (Red Hat 4.1.1-1)
> A quick check of google for the
> unterminated argument list in macro error makes it look like that could be
> an issues (on my systems, it wor
