Re: [PyMOL] Script to calculate Fab elbow angle

2012-06-15 Thread Jason Vertrees
Jared, Very cool script -- and beautiful visualizations. It's good to note that since it's in git-repo the new Plugin Manager can access it (just be sure to install COM and transformations, first). What used to take 3--5 minutes (downloading each script and putting them somewhere after cleaning u

[PyMOL] Script to calculate Fab elbow angle

2012-06-15 Thread Sampson, Jared
Hello all - I'd like to share with you this script that I recently added (with Troels' help) to the PyMOL Wiki. http://www.pymolwiki.org/index.php/Elbow_angle Given a PyMOL object containing an antibody Fab fragment complex, light and heavy chain IDs for the Fab, and residue numbers for the bo