[PyMOL] ray trace mode

2015-03-08 Thread Matzov Donna
Hi pymol users How can I trace my model (like when using set ray_trace_mode, 1), without tracing the mesh around it? Thanks! Donna -- Dive into the World of Parallel Programming The Go Parallel Website, sponsored by Int

Re: [PyMOL] ray trace mode 1 playing up pymol 1.7.4?

2014-12-16 Thread Andreas Warnecke
Hi, This may also be related to the setting: ray_trace_mode Try: set ray_trace_mode, 0 This will deactivate outlines (ray_trace_color) during ray tracing. The wiki page has some examples. Cheers, Andreas On Dec 16, 2014 6:05 PM, "H. Adam Steinberg" wrote: > The thickness, or weight of the bl

Re: [PyMOL] ray trace mode 1 playing up pymol 1.7.4?

2014-12-16 Thread H. Adam Steinberg
The thickness, or weight of the black outline is related to the size of the viewport or the ray command. If you ray the image larger, the thickness of the black outline will be greatly reduced. This will improve the clarity of colored sphere surface by reducing the amount of black in those area

Re: [PyMOL] Ray trace mode 1 outline thickness

2014-05-14 Thread Sampson, Jared
Hi Martin - Try increasing the `ray_trace_gain` setting. Default value is 0.12, so maybe try 1 or 2. If you go much higher, you’ll start to see additional lines or spots. Cheers, Jared -- Jared Sampson Xiangpeng Kong Lab NYU Langone Medical Center http://kong.med.nyu.edu/ On May 14, 20

[PyMOL] Ray trace mode 1 outline thickness

2014-05-14 Thread Martin Hediger
Hi guys I wonder if you could help, I'm rendering this image: http://qmviews.blogspot.ch/2014/05/illustrating-protein-structures.html and I wonder if and how I could increase the thickness of the black outlines? Thanks for help Martin --

Re: [PyMOL] Ray Trace Mode 1 and Labels

2011-10-15 Thread Thomas Holder
Hi Jack, you could render the labels to a separate image and assemble both images using Photoshop, Gimp, etc. set ray_trace_mode, 1 hide labels png image1.png, ray=1 set ray_trace_mode, 0 as labels set label_font_id, 7 set label_size, 20 set label_color, black set label_outline_color, white png

Re: [PyMOL] Ray Trace Mode 1 and Labels

2011-10-14 Thread Tsjerk Wassenaar
Hi Jack, Unfortunately, that is not possible. The ray-trace mode affects the behaviour/display of edges during raytracing, It's basically doing edge detection, similar to what can be done in image processing afterwards. So, it's similar to having an image and wanting to enhance edges on some, but

[PyMOL] Ray Trace Mode 1 and Labels

2011-10-14 Thread Jack Orford
Is there a way to stop ray_trace_mode 1 putting an outline on labels? Although the outline looks quite good for the graphics, especially once they are printed, it makes the text look like blocky typewriter font. Any advice appreciated. Thanks --