Re: [PyMOL] running pse file in batch mode

2013-03-08 Thread Thomas Holder
Hi Jon, there is no need to convert the pse file into a script, just write a short script which loads the pse file in the beginning. load session.pse scene 001, recall viewport 800, 600 png scene001.png, ray=1 You can run that in batch mode. Cheers, Thomas On Mar 6, 2013, at 4:11 PM,

[PyMOL] running pse file in batch mode

2013-03-06 Thread Jonathan Grimes
I've have a pse file with a number of scenes defined. i would like to run the pse file without the gui…..but then select scenes via the external gui window….and render…… can i do this akin to batch mode ??? or can i convert the pse file into a pmol script ?? each scene