Hi Robert,
On 2004-05-24 13:46 you wrote:
>
> I probably have a very stupid question.
> How do I run the color_b.py script using the latest PYMOL on windows?
> Just clicking on it does not work, I also tried to run it by calling it from
> within pymol but this did not work either.
Sorry if the i
Hi Camille and Daniel,
I heard my name mentioned, so I'll join in!
* Daniel Rigden [2004-05-21 16:43] wrote:
> Hi Camille
>
> The Espript server is the easiest way I know. Go here
>
> http://prodes.toulouse.inra.fr/ESPript/cgi-bin/ESPript.cgi
>
> choose Execute then Expert mode. SUpply an a
Even easier than Espript is ConSurf
http://consurf.tau.ac.il/
You can either supply your own PDB or use one from RCSB. You can also
supply your own alignment or let Consurf build one from a PSI-BLAST
run.
The server returns several outputs, including:
*The alignment it used to generate the surfac
Hi Camille
The Espript server is the easiest way I know. Go here
http://prodes.toulouse.inra.fr/ESPript/cgi-bin/ESPript.cgi
choose Execute then Expert mode. SUpply an alignment and a
supplementary pdb file then execute. You get back an annotated
alignment + the pdb file with a conservation sc
Hello PyMol community!
is there any way to display sequence conservation on the surface of a
protein?
i.e. to use the info I have in a sequence alignment.
do I have to do this by hand?
Thanks,
Camille
