Hi,
the NEWS for R 2.4.0 has:
o hist(*, plot = FALSE) now warns about unused arguments.
I'm sure this does some good for someone somewhere, but it causes
lattice::histogram() calls to produce warnings now in certain cases,
which I need to fix. However, ?hist makes no mention of this new st
Gavin Simpson wrote:
> On Wed, 2006-10-11 at 17:58 -0400, T C wrote:
>> I'm not sure if this is the place to post this question, but, I am
>> having trouble compiling the source code. I do have a suitable C
>> compiler and f2c but I get this error when I run ./configure
>>
>> configure: error: --
On Wed, 2006-10-11 at 17:58 -0400, T C wrote:
> I'm not sure if this is the place to post this question, but, I am
> having trouble compiling the source code. I do have a suitable C
> compiler and f2c but I get this error when I run ./configure
>
> configure: error: --with-readline=yes (default) a
Seth's example is really good -- ExpressionSet extends eSet, and
featureNames is defined on eSet rather than ExpressionSet. To live
up to the documentation, we should end up at the help page with
\alias{featureNames,eSet-method}. A simpler example from the same
package is
?exprs(sample.ExpressionS
I'm not sure if this is the place to post this question, but, I am
having trouble compiling the source code. I do have a suitable C
compiler and f2c but I get this error when I run ./configure
configure: error: --with-readline=yes (default) and headers/libs are
not available
Any ideas? Thanks.
_
On 10/11/2006 4:26 PM, [EMAIL PROTECTED] wrote:
> On 10/11/2006 2:48 PM, Seth Falcon wrote:
>> Hi,
>>
>> Reading help("Documentation"), I'm led to believe that a help call
>> like:
>>
>> ?myFun(x, sqrt(wt))
>>
>> Will search for help on the appropriate method in the case that myFun
>> is generi
On 10/11/2006 2:48 PM, Seth Falcon wrote:
> Hi,
>
> Reading help("Documentation"), I'm led to believe that a help call
> like:
>
> ?myFun(x, sqrt(wt))
>
> Will search for help on the appropriate method in the case that myFun
> is generic. This isn't working for me. Here is an example using
Hi,
Reading help("Documentation"), I'm led to believe that a help call
like:
?myFun(x, sqrt(wt))
Will search for help on the appropriate method in the case that myFun
is generic. This isn't working for me. Here is an example using the
Biobase package:
## If Biobase is not installed
source
Yes, a bug.
The problem is that all generics start off with only 1 active argument
in the signature (for efficiency). As soon as a method is specified
with >1 args in the signature, the number of active arguments is
supposed to be incremented accordingly. But specifying the method for
the _g
Prof Brian Ripley <[EMAIL PROTECTED]> writes:
> The reason was (and is) that if datasets are in the namespace, functions
> in the namespace find them ahead of a dataset of the same name in the
> user's workspace.
That this is desirable seems to be where opinions differ. The
Bioconductor proje
I am sorry, it was my program's bug.
Yes, subset works!
Yes, nls works correctly!
I didn't pay enough attention to NAs.
NA threw off start value estimation in my program.
So, I got different results when I filtered NAs beforehand
and filtered by subset.
I also confused because subset does not appe
[EMAIL PROTECTED] writes:
> Full_Name: Tadashi Kadowaki
> Version: 2.4.0
> OS: Redhat Linux 9
> Submission from: (NULL) (58.12.166.67)
>
>
> Doesn't nls function support subset? It seems not to work.
> And, there are no information in the online help.
> Has it sunk into oblivion?
Whatever gave
This is not the place to ask a question: do read the FAQ.
?nls shows that nls does have a 'subset' argument, and it does work.
Compare
> ?nls
> x <- 1:10
> y <- 2*x + 3# perfect fit
> yeps <- y + rnorm(length(y), sd = 0.01) # added noise
> nls(yeps ~ a + b*x, start = l
Full_Name: Tadashi Kadowaki
Version: 2.4.0
OS: Redhat Linux 9
Submission from: (NULL) (58.12.166.67)
Doesn't nls function support subset? It seems not to work.
And, there are no information in the online help.
Has it sunk into oblivion?
__
R-devel@r-p
On Wed, 11 Oct 2006, Roger Bivand wrote:
> On Wed, 11 Oct 2006 [EMAIL PROTECTED] wrote:
>
>> Full_Name: Petr Savicky
>> Version: 2.4.0
>> OS: Fedora Core release 2
>> Submission from: (NULL) (62.24.91.47)
>>
>>
>> the error is
>>
>>> binom.test(0.56*1,1)
>> Error in binom.test(0.56 * 1
On Wed, 11 Oct 2006 [EMAIL PROTECTED] wrote:
> Full_Name: Petr Savicky
> Version: 2.4.0
> OS: Fedora Core release 2
> Submission from: (NULL) (62.24.91.47)
>
>
> the error is
>
> > binom.test(0.56*1,1)
> Error in binom.test(0.56 * 1, 1) :
> 'x' must be nonnegative and
This is a problem in a (non-CRAN) contributed package, and so a misuse of
R-bugs: please do read the R FAQ and posting guide.
Binary versions of packages need to be matched to versions of R: almost
certainly this needs to be re-installed from the sources (which it seems
that author is not distr
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