Hi
If you execute .libPaths() in both instances of R what do you see then?
There shouldn't be any differences.
Br.
Frede T�gersen
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Dato:26/09/2014 16.41 (GMT+01:00)
Til: R-help ,ess-h...@stat.math.ethz.ch
Congratulations Eva
I have been following this thread loosely. Well in the sense that I really
didn't understand what was going on but hopefully thinking that I could learn
something from it.
Your approach to your particular setup didn't pay any attention to the heed by
Duncan. So you hard he
Well
plot(density(a$frequency), col = "blue")
lines(density(b$frequency), col = "green")
Where a is as Jim defined it and b similar from the other data file.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance &a
ny so even the
corporate language is English our signature in our emails is honoring the
regional greetings from the country that we work in.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T
t(data), 2)))
>
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This e-m
Setting row.names = FALSE?
Br. Frede
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Dato:03/07/2014 19.02 (GMT+01:00)
Til: r-help@r-project.org
Emne: [R] How to hide the vector number output in write.table function?
What I'm trying to do should be simple enoug
names)
> query
[1] "select id from table where name in ('A','B','C','D','E')"
>
> dataFromDB <- sqlQuery(dbConn, query)
This should work for MS SQL and MySQL servers.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgerse
Hi
I can see that you do have troubles understanding how all this works using the
RODBC package. Peter wasn't really being helpful to you.
This is something that is quite difficult to help with not sitting beside you.
Do you not having some local help from e.g. the IT department?
However for a
Hi
See inline below for my comments.
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Frede Aakmann Tøgersen
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which columns should not be
converted to factors.
Note: to suppress all conversions including those of numeric
columns, set 'colClasses = "character"'.
Note that 'as.is' is specified per column (not per variable)
a
<- read.table(text = "absfjdslf
+ jfdldskjff
+ jfsldfjslk",
+ colClasses = "character")
> str(tmp)
'data.frame': 3 obs. of 1 variable:
$ V1: chr "absfjdslf" "jfdldskjff" "jfsldfjslk"
Yours sincerely / Med venlig hilsen
Frede Aakman
Well you can use the main argument of the plot function together with a call to
sprintf(). Like this:
main = sprintf("Plot %s", i)
Best regards
Frede
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Dato:24/06/2014 15.19 (GMT+01:00)
Til: r-help
Emne: [R] Making sev
You are really not helpful here. Are we talking the same scientific language?
Br. Frede
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Dato:19/06/2014 15.46 (GMT+01:00)
Til: Frede Aakmann Tøgersen ,Bart Kastermans
Cc: r-help@r-project.org
Emne: Re: [R] extrac
As Peter and Bart I really have a problem understanding you.
Perhaps if you tell us what your desired result is going to used for we can be
more helpful. You can do that using your latest example.
In that example you want a matrix of sets of row and column indices. This will
probably have to be
Hi Eliza
To me it seems like that you're not thinking before you messing about with the
data before an analysis.
The years with data for 366 days is leap years. It happens every fourth year
and the extra day falls on the 29th of februar. I guess it is the results from
the dcast function that s
Hi
SAS is famous for handling large data sets. For more than 10 years ago S+
introduced a module for large data sets. Never used it, more money for license
for a poor research institute.
Today I have a laptop with 8 Gb. If that's not enough then the head nodes on
our cluster has 64 Gb and some
Yes, and at that time there were in fact some people in the department studying
biodiversity or perhaps I should say the lack of biodiversity in the modern
agricultural farmland in Denmark. And now some years later things are sadly not
better. Today the plants I'm studying is wind power plants,
information, thank you!.
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Frede Aakmann Tøgersen
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Hi
Not sure was is going on!
Can you try to do the sqlQuery without the paste function?
Like this:
sqlQuery(DRCch,"SELECT * FROM tblCeramicWare"))
By the way your sqlTables doesn't list the tblCeramicWare table.
Br.
Frede Aakmann Tøgersen
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Hi Hurr
I'm getting curious!
You have now spent several weeks on this plot. One reason to do this if the
journal request it. Is that the case?
Or is it your own hard minded way to have your plot made the way you like.
In my mind a very good plot support ones data. Is that what you want? Does
1a 31 55 62 NA NA NA
42v 42 NA NA 40 NA NA
56a 30 23 74 84 10 NA
>
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Hi Monaly
I guess that if you made the neighborhood data available (using dput()) then
Arun will easily show you how to automatically with only a couple of code
lines instead of those many lines you had to make by hand.
Have a nice day.
Yours sincerely / Med venlig hilsen
Frede Aakmann
Like this:
> x <- 1:10
> y <- rnorm(10)
> f <- approxfun(x, y)
> f
function (v)
.approxfun(x, y, v, method, yleft, yright, f)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
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Hhhhmmhhhm, but is that not the same as
mean(as.matrix(x))
?
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Frede Aakmann Tøgersen
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Yes and you do that by going to
https://stat.ethz.ch/mailman/listinfo/r-help
and fill in the required information.
Sorry to loose you on this list.
Best regards
Frede
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Dato:21/05/2014 16.03 (GMT+01:00)
Til:
Hi
See ?plotmath.
Something like this:
plot(1, 1, main = expression(paste("INTERVALS ", lambda)))
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
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rely / Med venlig hilsen
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r this:
plot(augFM1, strip = strip.custom(par.strip.text = list(cex = 0.5)))
If the latter I will leave it as an exercise to you to change the default strip
height. Google for r lattice strip height
Have a nice day.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D
Hi David
Please keep the r-help list on when you reply, Iâm not your personal
consultant and David Winsemius would also like see how this progress since he
is also trying to help you.
Iâm still guessing, so is this what you want
For (i in c(1,5,8)){
}
Please, if you hope to get some
w) > 6))
[1] 2 3
By the way there is a function called subset so you could run into trouble
later on when calling your list for subset.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
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Perhaps, but Arun answered you question using regular expressions. So didn't
that not do the job?
Br.
Frede
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Dato:14/05/2014 22.48 (GMT+01:00)
Til: r-help@r-project.org
Emne: Re: [R] Put short string labels vertically
Have a look at regular expression in R!
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Frede Aakmann Tøgersen
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Have a look at ?sweep
Br. Frede
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Dato:14/05/2014 16.53 (GMT+01:00)
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Emne: [R] matrix column division by vector
Hi,
What is the elegant script to divide the columns of a matrix by the res
Like in ?qqplot
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Emne: Re: [R] gumbel distribution
Dear Arun, Rolf and Frede,
Thankyou very much for youe help. I mana
ories.
So the first argument to install.packages() should be a string or a vector of
strings. In the first case you install one package, in the latter you install a
list of packages.
So you will probably get plotrix installed if you do
install.packages("plotrix")
Or
install.pack
Oh, I see now. I'm blushing.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
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the session you have
open).
2) Launch exactly the code above in the newly opened session.
3) If everything works be happy.
4) If you get some errors then copy and paste the whole output in that session
and post it to the list.
Then perhaps we may be able to help you. Certainly not before that.
H
Don't know if I understand your last comment but I surely don't think that the
Weibull and Gumbel distributions are the same. See their density function on
e.g. Wikipedia.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance
and 'scale'.
Usage:
dweibull(x, shape, scale = 1, log = FALSE)
pweibull(q, shape, scale = 1, lower.tail = TRUE, log.p = FALSE)
qweibull(p, shape, scale = 1, lower.tail = TRUE, log.p = FALSE)
rweibull(n, shape, scale = 1)
Yours sincerely / Med venlig hilsen
Fr
Hi
Why not use functional data analysis. There is an R package called fda to help
you.
See http://www.psych.mcgill.ca/misc/fda/ex-weather-a1.html for an example
exploring temperature from different locations.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D
Wov, so SAS/JMP has an interface to R. I'm amazed and it looks like SAS is
taking the "competition" from R seriously.
I'll check it out.
Frede
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Til: r-help@r-project.or
Hi
".." is the parent directory whereas "." is the current directory, so you
probably want
list.files(path = "./Least Developed Countries")
instead of
list.files(path = "../Least Developed Countries")
Yours sincerely / Med venlig hilsen
Frede Aakmann
?
This is on my Windows 8 OS, but you can track it many years back!!
Yours sincerely / Med venlig hilsen
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e
[1,] FALSE FALSE FALSE
[2,] FALSE TRUE FALSE
[3,] FALSE FALSE FALSE
> which(foo == "sum", arr.ind = TRUE)
row col
[1,] 2 2
>
But can one risk this to fail if the class of some of the columns cannot be
compared to a string?
Yours sincerely / Me
So Christoph now have 3 methods giving him three different results. Of course
it is not really clear what Christoph really wants ;-)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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T +45 9
quot;, h = TRUE)
mydat$NdayBefore <- c(NA, mydat[-nrow(mydat), "N"])
head(mydat)
subset(mydat, N <= 0.3)
subset(mydat, N <= 0.3 & NdayBefore <= 0.3)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
No it is difficult to say when I donât know what you did in Excel and Sigma
Plot. The latter I donât know and do not use it my self.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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T +45 9730 5
irs.panel() function
and you have it.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
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just copying those from your email. Given those you get what
I showed to you.
Frede
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Dato:23/04/2014 12.11 (GMT+01:00)
Til: Frede Aakmann Tøgersen ,r-help@r-project.org
Emne: Re: RE: [R] finding value for a para
Sorry I made a copy and paste error. To get all the details of the curves
between 0 and I had to use:
E <- seq(0,10, len = 2000)
Sorry for the inconvenience.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Tec
ot
[1] -9.45929e-05
$iter
[1] 9
$init.it
[1] NA
$estim.prec
[1] 6.103516e-05
But
Yours sincerely / Med venlig hilsen
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http:/
a huge dataframe and during the loop
calculated the row indices of that dataframe for each raster into the result
from extract should be put.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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hilsen
Frede Aakmann Tøgersen
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o :-(
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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This e-mail is subjec
Hi
Couldn't find a zip file in the archives.
Why didn't 'R CMD build' (in a command shell on Windows) not make a zip file? I
did try to build from the climatol library that holds the typical files as
DESCRIPTION, LICENSE, etc. as well as folders like R, etc.
Did you see the debug information o
*, "conn_id")=
Browse[2]> file
description class
"climatol_2.2.tar.gz/DESCRIPTION" "gzfile"
mode text
&quo
tmp
str(tmp)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
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This e-mai
(min, max)
See the values entry. Since this is a color image there are 3 bands. What you
see above is for the first band ("red").
Going from 0 to 255 for red is no surprise. You will probably see the same for
green and blue as well.
What are you really looking for?
Yours sincerely /
e : in memory
names : part.a
values : 0, 1 (min, max)
The difference can be seen by plotting.
plot(rasterMG)
plot(rasterMG.proj)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
lerance, round) :
dimension 1 : coordinate intervals are not constant
>
A warning and an error indicates that the projection results in something that
is not on a regular grid.
I don't know what to do but to read some more of the documentation for sp,
rgdal, etc.
Hopefully somebody come
lt;- spTransform(rasterDF1, crs("+init=epsg:21781"))
>
Also there is a spTransform both in the rgdal and sp packages. So are they
masking each other? rgdal should be before sp in the search() list.
I cannot be of more help since you provided no data.
Yours sincerely / Med venlig hils
Oh, I see.
Actually I forgot to check whether if could be an advantage to use the
URLencoding () function on queryUrl. I'll check later.
Br. Frede
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Fra: arun
Dato:12/04/2014 12.45 (GMT+01:00)
Til: Frede Aakmann Tøgersen
Cc: Eliz
Hi Arun
It seems to be an error on the server side and not on the client.
The error on the server results in the client receiving a string giving the
type of error on the server. And this doesn't work with read.table of course.
So if one wants to query for thousands of point one really needs to
-0.628971-0.312928
1.434294-0.637825-1.605758
0.645651 0.248138-1.161756
>
With this approach I don't think you can get rid of the space between positive
numbers because there should be place for a minus sign for negative values. If
that's what you want
Yours sincerely / Med
t;list", nrow(df2))
names(precipList) <- fileNames
for (i in 1:nrow(df2)){
queryUrl <- sprintf(urlPattern, df2[i, 1], df2[i, 2], df2[i, 1], df2[i, 2])
u <- url(queryUrl, open = "r")
precipList[[i]] <- read.table(u, skip = 4, header = TRUE, na.strings =
"-.9
I think you have calculated the wrong probabilities. Shouldn't it be
> x <- c(2,2,6,2,1,1,1,3)
> MASS::fractions(table(x)/length(x))
x
1 2 3 6
3/8 3/8 1/8 1/8
>
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Perfo
gets the label as a numeric
> as.numeric(as.character(a[,1]))
[1] 2.2194
>
> ## do this for the first 2 columns
> for (i in 1:2) a[,i] <- as.numeric(as.character(a[,i]))
>
> ## the structure of a
> str(a)
'data.frame': 1 obs. of 4 variables:
$ GHP: num 2.22
We can't say because we don't know how a was created.
Please email the output from
str(a)
and
dput(a)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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See ? plot.default. Add the log = "y" to your call. Remember to set ylim to
positive values since log only takes positive values, e.g. ylim = c(1e-6, 0.1).
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Techno
R.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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Company reg.
Yes R on Windows have something like that you mentioned. I have only tried it
in conjunction with read.table.
I'm a bit surprised about the \\ on a linux OS. I'm also surprised that in a
file manager on Windows you can paste e.g. C:/users/frtog/Desktop and it can
find its way to the folder. Wei
Sorry forgot to mention that you probably are better of using <= and >= instead
of ==
Br. Frede
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Til: r-help@r-project.org
Emne: [R] locating a data value in 3-dimensional data
Hi
I know there is a arr.index (or something like that, I'm not near my R right
now) argument to which (). I have used it for 2-dim arrays and never for higher
dimensions. But try it out by setting the argument to TRUE.
Br. Frede
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t;ESSR" "package:utils"
[10] "package:datasets" "package:methods" "Autoloads"
[13] "package:base"
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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5% and 75% quantile
q25 <- qnorm(0.25, mean = Mean, sd = SD)
q75 <- qnorm(0.75, mean = Mean, sd = SD)
yourstats <- matrix(c(RangeLower, q25, Median, q75, RangeUpper), ncol = 1)
bpstats$stats <- yourstats
bxp(bpstats, outl = FALSE)
Yours sincerely / Med venlig hilsen
Frede Aakma
Or using the original data and the subset argument of boxplot:
boxplot(Barium~Well.ID,data=mydata, main="Barium", ylab="mg/L", subset =
Well.ID %in% c("MW-1", "MW-2"))
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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;-)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
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http://www.vestas.com<http://www.vestas.com/>
Company re
regard" or something like that.
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m 2013 and can be found in the archives and "robComposition" still
maintained.
Hope that helps, it is help for yourself to find a solution.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Serv
.
However you can now do this.
antdist$ts <- as.character(antdist$ts)
antdist$ts <- as.POSIXct(strptime(antdist$ts, format = "%m/%d/%Y %H:%M:%S"))
See ?factor, ?as.POSIXct, ?strptime
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Pl
Try
mixedsort in gtools package
Br. Frede
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Fra: eliza botto
Dato:01/04/2014 18.10 (GMT+01:00)
Til: r-help@r-project.org
Emne: [R] importing multiple text files in R
Dear useRs,
I have a number of text file located at a certain lo
Perhaps have a look at the sp package and especially the over function.
Br. Frede
Sendt fra Samsung mobil
Oprindelig meddelelse
Fra: Leonid Shvartser
Dato:27/03/2014 20.27 (GMT+01:00)
Til: r-help@r-project.org
Emne: [R] index polygons
Hello,
I need to compare a polygon with
<- c(n, m)
image(rstn)
rsnw <- ccc[50401:75600]
rsnw[rsnw < -90] <- NA
dim(rsnw) <- c(n, m)
image(rsnw)
I will leave it to you to interpret rstn and rsnw in regards to prcp.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performanc
Hi
Perhaps you can find something at
http://cran.r-project.org/web/views/Bayesian.html.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T +45 9730 5135
M +45 2547 6050
fr...@vestas.
ge/ray crossing method in Eric's
wording. The performance is between the best as shown by Eric.
I know there are other implementations in R in other packages but I do not have
the full overview of all methods.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D
p("world", "ireland", plot = FALSE, namesonly = TRUE))
ireland <- map("world", "Ireland:Achill Island", exact = TRUE, xlim = xr, ylim
= yr)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance &am
otGEOmapXY(japmap, LIM=c(PLOC$LON[1], PLOC$LAT[1],PLOC$LON[2],
PLOC$LAT[2]) , PROJ=PROJ, add = FALSE )
pointsGEOmapXY(lon = 139, lat = 35.5, PROJ = PROJ, col = "red", pch = "*", cex
= 5)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgerse
Actually if you're missing the north-east part of the whole island do:
map('worldHires', c('Ireland', 'UK:Northern Ireland')
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology &a
1YMsU4uUJcikkgXZ_4HwCQ
See the first hit:
http://www.arcgis.com/home/item.html?id=ae74a8497a1041669a9d2165a0f450b6
In most cases there are R packages dealing with the different formats. Just
google the CRAN.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Per
cerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T +45 9730 5135
M +45 2547 6050
fr...@vestas.com
http://www.vestas.com
Company reg. name: Vestas Wind Systems A/S
This e-mail is subject to our e-mail discla
Hopefully good suggestions from our side.
Well, is it not feasible to point people to man pages that thinks _list_ is the
same as _c_ , so tomorrow I will file a bug (what is that called for
instructions) report (if I can remember).
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
;cex.axis"),
cex.lab=par("cex.lab"), font.axis=par("font.axis"),
font.lab=par("font.lab"), lty.axis=par("lty"),
lty.grid=par("lty"), lty.hide=NULL, lty.hplot=par("lty"),
log="", ...)
Sorry this should of course be for all on R-help.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T +45 9730 5135
M +45 2547 6050
fr...@vestas.com
http://www.vestas.com
Company reg. name
tion("layout.heights")$panel,
panel.width = lattice.getOption("layout.widths")$panel,
save.object = lattice.getOption("save.object"),
panel.error = lattice.getOption("panel.error"),
prefix,
...)
To be in superi
that a LIST)
However this works:
do.call(grid.arrange,c(lattice.plots, ncol = 1))
WHAT IS THE DIFFERNCE BETWEEN c() and list()
Have a nice day to all of you.
And thank you all developers for R. I cannot live without it.
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specia
yplot(rnorm(10) ~ 1:10, type = "b"))
do.call(grid.arrange, lattice.plots)
There is most likely a loop hidden somewhere in the do.call function ;-)
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & S
Hi
See
?try
?tryCatch
So you still want to do these distribution tests even though you have been
warned not to?
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T +45 9730 5135
M +45 2547
ata with timestamps those are usually save
in the "UTC" = "GMT" zone format because we get data from all over the world
and we do not want to deal with day light saving times. So do this to begin
with in the R session:
> Sys.setenv(TZ="GMT")
## and then we have:
&
Hi
Well, for is a basic control-flow construct and as such a reserved word in R.
See e.g. ?for
Yours sincerely / Med venlig hilsen
Frede Aakmann Tøgersen
Specialist, M.Sc., Ph.D.
Plant Performance & Modeling
Technology & Service Solutions
T +45 9730 5135
M +45 2547 6050
fr...@ve
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